Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc03202 and SMc03203 are separated by 3 nucleotidesSMc03203 and SMc03204 are separated by 6 nucleotidesSMc03204 and SMc03205 are separated by 384 nucleotidesSMc03205 and SMc03206 are separated by 163 nucleotides SMc03202: SMc03202 - branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data), at 3,166,130 to 3,167,143 SMc03202 SMc03203: SMc03203 - Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) (from data), at 3,167,147 to 3,168,427 SMc03203 SMc03204: SMc03204 - Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data), at 3,168,434 to 3,169,828 SMc03204 SMc03205: SMc03205 - formyltetrahydrofolate deformylase, at 3,170,213 to 3,171,097 SMc03205 SMc03206: SMc03206 - maleylacetoacetate isomerase (glutathione transferase zeta 1) protein, at 3,171,261 to 3,171,914 SMc03206
Group Condition SMc03202 SMc03203 SMc03204 SMc03205 SMc03206
carbon source L-Leucine (C) -3.6 -3.8 -2.9 N.D. -0.1
nitrogen source L-Leucine (N) -0.4 -1.1 -0.7 N.D. -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -1.4 -0.5 N.D. -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.8 -0.5 N.D. -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -0.9 -0.8 N.D. +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.9 -0.9 N.D. +0.1
nitrogen source L-Arginine (N) -0.1 -1.4 +0.2 N.D. -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -0.4 -0.3 N.D. -0.2
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 -0.2 -0.6 N.D. -0.1
stress Cisplatin 0.0005 mg/ml -0.1 -0.1 -0.5 N.D. -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.3 -0.7 N.D. +0.1
carbon source D-Mannitol (C) -0.1 -0.4 -0.2 N.D. -0.3
r2a-hepes control R2A-HEPES control for volatile experiments -0.1 -0.5 -0.2 N.D. -0.2
stress copper (II) chloride 1 mM +0.1 -0.5 -0.3 N.D. -0.3
stress D-Cycloserine 0.05 mg/ml +0.1 -0.2 -0.6 N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 -0.2 -0.8 N.D. +0.2
stress Chloride 200 mM -0.3 +0.2 -0.5 N.D. -0.0
carbon source NAG (C) +0.0 -0.6 +0.2 N.D. -0.2
stress 6-Pentyl-2H-pyran-2-one 0.4177863333 mM -0.0 +0.2 -0.9 N.D. +0.2
stress Cisplatin 0.001 mg/ml -0.1 +0.4 -0.3 N.D. -0.2
pH LB, pH7 -0.1 +0.2 -0.5 N.D. +0.2
nitrogen source L-Asparagine (N) +0.3 +0.3 -0.2 N.D. -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -0.1 +0.3 N.D. +0.3
stress Polymyxin B sulfate 0.00005 mg/ml -0.1 -0.7 +0.8 N.D. +0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.1 +0.2 -0.4 N.D. +0.3
nitrogen source Cytosine (N) -0.1 +0.6 +0.1 N.D. -0.4
carbon source Myristic (C) +0.2 +0.6 -0.1 N.D. -0.2
stress Aluminum chloride +0.2 -0.4 +0.7 N.D. +0.1
tsb Day4 TSB +0.2 +0.3 +0.3 N.D. +0.1
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.1 +0.5 +0.6 N.D. +0.3
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