Fitness for 5 genes in Sinorhizobium meliloti 1021

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 243 experiments or choose conditions or try the comparative fitness browser

500 ntSMc03168 and SMc03169 are separated by 305 nucleotidesSMc03169 and SMc03170 are separated by 119 nucleotidesSMc03170 and SMc03171 are separated by 166 nucleotidesSMc03171 and SMc03172 are separated by 267 nucleotides SMc03168: SMc03168 - multidrug efflux system protein, at 3,128,773 to 3,129,921 SMc03168 SMc03169: SMc03169 - transcriptional regulator, at 3,130,227 to 3,130,937 SMc03169 SMc03170: SMc03170 - transcriptional regulator, at 3,131,057 to 3,131,896 SMc03170 SMc03171: SMc03171 - hypothetical protein, at 3,132,063 to 3,132,815 SMc03171 SMc03172: SMc03172 - glutamyl-tRNA synthetase, at 3,133,083 to 3,134,540 SMc03172
Group Condition SMc03168 SMc03169 SMc03170 SMc03171 SMc03172
carbon source Myristic (C) -2.6 N.D. -0.0 +0.1 N.D.
carbon source Myristic (C) -2.5 N.D. -0.0 +0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 N.D. -0.3 -1.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 N.D. -0.0 -0.2 N.D.
stress copper (II) chloride 1 mM -0.1 N.D. +0.2 -0.5 N.D.
carbon source Glycerol (C) -0.5 N.D. +0.1 +0.3 N.D.
nitrogen source Gelatin (N) -0.4 N.D. -0.1 +0.5 N.D.
nitrogen source Cytosine (N) -0.3 N.D. -0.1 +0.3 N.D.
stress Paraquat dichloride 0.2 mg/ml +0.2 N.D. +0.1 -0.4 N.D.
carbon source Lactitol (C) -0.3 N.D. -0.1 +0.4 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 N.D. +0.0 +0.4 N.D.
pH LB, pH8 -0.1 N.D. -0.1 +0.4 N.D.
nitrogen source nitrate (N) -0.2 N.D. +0.0 +0.4 N.D.
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.1 N.D. -0.2 +0.3 N.D.
stress Nickel (II) chloride 1 mM -0.2 N.D. +0.2 +0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 N.D. +0.3 +0.2 N.D.
stress Fusidic 0.0001 mg/ml +0.2 N.D. -0.1 +0.3 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 N.D. +0.1 +0.6 N.D.
nitrogen source L-Leucine (N) -0.3 N.D. +0.2 +0.5 N.D.
lb no stress control LB no stress control +0.2 N.D. -0.1 +0.4 N.D.
pH LB, pH8 -0.1 N.D. +0.0 +0.7 N.D.
stress Sisomicin 0.004 mg/ml +0.1 N.D. +0.1 +0.4 N.D.
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.1 N.D. +0.3 +0.5 N.D.
nitrogen source L-Arginine (N) +0.1 N.D. -0.1 +0.7 N.D.
lb LB +0.1 N.D. +0.2 +0.4 N.D.
stress Paraquat dichloride 0.05 mg/ml +0.2 N.D. +0.0 +0.6 N.D.
lb LB +0.3 N.D. +0.1 +0.5 N.D.
stress Thallium(I) acetate 0.001 mg/ml +0.5 N.D. +0.1 +0.4 N.D.
stress D-Cycloserine 0.05 mg/ml +0.5 N.D. +0.0 +0.5 N.D.
stress Thallium(I) acetate 0.0025 mg/ml +0.3 N.D. +0.3 +0.5 N.D.
remove
SMc03168
plot		 remove
SMc03169
plot		 remove
SMc03170		 remove
SMc03171
plot		 remove
SMc03172
plot