Fitness for 5 genes in Sinorhizobium meliloti 1021

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 243 experiments or choose conditions or try the comparative fitness browser

500 ntSMc03127 and SMc03126 overlap by 4 nucleotidesSMc03126 and SMc03125 overlap by 4 nucleotidesSMc03125 and SMc03124 are separated by 93 nucleotidesSMc03124 and SMc03123 are separated by 381 nucleotides SMc03127: SMc03127 - ABC transporter permease, at 3,202,125 to 3,203,051 SMc03127 SMc03126: SMc03126 - transport system ATP-binding ABC transporter protein, at 3,203,048 to 3,204,046 SMc03126 SMc03125: SMc03125 - transport system ATP-binding ABC transporter protein, at 3,204,043 to 3,205,056 SMc03125 SMc03124: SMc03124 - periplasmic binding ABC transporter protein, at 3,205,150 to 3,206,778 SMc03124 SMc03123: SMc03123 - transcriptional regulator, at 3,207,160 to 3,208,107 SMc03123
Group Condition SMc03127 SMc03126 SMc03125 SMc03124 SMc03123
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.5 N.D. N.D. -2.4 +1.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.5 N.D. N.D. -1.2 +0.1
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -3.5 N.D. N.D. -0.4 -0.4
stress Paraquat dichloride 0.3 mg/ml -3.7 N.D. N.D. -0.7 +0.5
stress Nickel (II) chloride 1 mM -2.2 N.D. N.D. -1.4 -0.1
lb LB -1.3 N.D. N.D. -3.3 +1.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.7 N.D. N.D. -1.0 +1.1
stress copper (II) chloride 1 mM -3.6 N.D. N.D. -0.5 +0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.6 N.D. N.D. -1.9 +1.3
pH LB, pH7 -2.6 N.D. N.D. -1.3 +0.9
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -2.0 N.D. N.D. -1.5 +0.6
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -3.0 N.D. N.D. -0.1 +0.5
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -2.7 N.D. N.D. -0.7 +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.6 N.D. N.D. -0.3 +1.3
r2a-hepes control R2A-HEPES control for volatile experiments -2.9 N.D. N.D. +0.1 +0.4
nitrogen source L-Asparagine (N) -1.8 N.D. N.D. -1.2 +0.6
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -1.8 N.D. N.D. -1.2 +0.7
stress Cisplatin 0.001 mg/ml -2.3 N.D. N.D. -0.3 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.6 N.D. N.D. -0.2 +0.7
temperature LB, 30C -1.3 N.D. N.D. -1.5 +0.9
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -1.6 N.D. N.D. -0.6 +0.8
r2a-hepes control R2A-HEPES control for volatile experiments -2.0 N.D. N.D. -0.2 +0.8
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -2.0 N.D. N.D. -0.2 +0.8
pH LB, pH7 -1.2 N.D. N.D. -0.9 +0.9
temperature LB, 30C -1.3 N.D. N.D. -0.8 +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.9 N.D. N.D. -0.2 +1.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 N.D. N.D. -1.4 +1.4
pH LB, pH6 -0.4 N.D. N.D. -1.4 +2.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 N.D. N.D. -0.7 +1.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +2.6 N.D. N.D. -1.0 -0.0
remove
SMc03127
plot		 remove
SMc03126
plot		 remove
SMc03125		 remove
SMc03124
plot		 remove
SMc03123
plot