Fitness for 5 genes in Sinorhizobium meliloti 1021

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 243 experiments or choose conditions or try the comparative fitness browser

500 ntSMc03119 and SMc03118 are separated by 3 nucleotidesSMc03118 and SMc03117 overlap by 8 nucleotidesSMc03117 and SMc03116 are separated by 47 nucleotidesSMc03116 and SMc03115 are separated by 231 nucleotides SMc03119: SMc03119 - ABC transporter ATP-binding protein, at 3,218,096 to 3,218,797 SMc03119 SMc03118: SMc03118 - ABC transporter permease, at 3,218,801 to 3,219,688 SMc03118 SMc03117: SMc03117 - ABC transporter permease, at 3,219,681 to 3,220,682 SMc03117 SMc03116: SMc03116 - alcohol dehydrogenase, at 3,220,730 to 3,222,325 SMc03116 SMc03115: SMc03115 - partial transposase for insertion sequence element ISRM5, at 3,222,557 to 3,222,832 SMc03115
Group Condition SMc03119 SMc03118 SMc03117 SMc03116 SMc03115
nitrogen source L-Arginine (N) -1.4 -0.2 -0.4 +0.0 N.D.
carbon source Uridine (C) -0.3 -0.2 -0.3 -0.7 N.D.
nitrogen source nitrate (N) -0.3 -0.4 -0.3 -0.0 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -0.4 -0.1 -0.2 N.D.
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.1 -0.2 -0.3 -0.2 N.D.
stress Polymyxin B sulfate 0.00005 mg/ml -0.6 -0.2 -0.2 +0.0 N.D.
nitrogen source L-Histidine (N) -0.1 +0.0 -0.2 -0.5 N.D.
carbon source D-Glucose (C) -0.5 -0.1 -0.1 -0.1 N.D.
stress Aluminum chloride -0.6 -0.1 -0.2 +0.1 N.D.
r2a control R2A control for volatile experiments -0.5 -0.3 -0.2 +0.2 N.D.
nitrogen source Gly-DL-Asp (N) -0.4 -0.3 +0.2 -0.0 N.D.
r2a control R2A control for volatile experiments -0.7 +0.1 +0.0 -0.0 N.D.
nitrogen source L-Glutamine (N) -0.6 +0.1 +0.0 +0.1 N.D.
carbon source Beta-Lactose (C) +0.2 +0.1 -0.1 -0.5 N.D.
carbon source 5-Aminovaleric (C) -0.3 +0.1 -0.2 +0.4 N.D.
stress nitrate 40 mM +0.1 +0.3 +0.1 -0.4 N.D.
pH LB, pH6 -0.4 +0.1 +0.2 +0.2 N.D.
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.7 -0.2 -0.0 -0.3 N.D.
carbon source D-Glucosamine Hydrochloride (C) +0.6 -0.1 -0.1 -0.2 N.D.
lb LB -0.0 +0.2 +0.3 -0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 -0.3 +0.1 +0.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -0.1 -0.1 +0.3 N.D.
nitrogen source Cytosine (N) +0.8 -0.2 -0.1 +0.0 N.D.
stress Thallium(I) acetate 0.001 mg/ml +0.4 +0.3 +0.1 -0.1 N.D.
stress Sisomicin 0.004 mg/ml -0.0 +0.2 +0.3 +0.2 N.D.
carbon source succinate (C) +0.4 +0.2 -0.0 +0.2 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 -0.4 +0.2 +0.3 N.D.
stress Thallium(I) acetate 0.0025 mg/ml +0.5 +0.2 +0.2 -0.0 N.D.
carbon source acetate (C) +0.6 +0.2 +0.1 +0.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +0.1 +0.1 +0.5 N.D.
remove
SMc03119
plot		 remove
SMc03118
plot		 remove
SMc03117		 remove
SMc03116
plot		 remove
SMc03115
plot