Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc03107 and SMc03106 are separated by 45 nucleotidesSMc03106 and SMc03105 are separated by 160 nucleotidesSMc03105 and SMc03104 are separated by 168 nucleotidesSMc03104 and SMc03103 are separated by 345 nucleotides SMc03107: SMc03107 - hypothetical protein, at 3,234,292 to 3,235,014 SMc03107 SMc03106: SMc03106 - hypothetical protein, at 3,235,060 to 3,235,785 SMc03106 SMc03105: SMc03105 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase, at 3,235,946 to 3,237,121 SMc03105 SMc03104: SMc03104 - 5-aminolevulinate synthase, at 3,237,290 to 3,238,507 SMc03104 SMc03103: SMc03103 - carbon monoxide dehydrogenase medium subunit transmembrane protein, at 3,238,853 to 3,239,650 SMc03103
Group Condition SMc03107 SMc03106 SMc03105 SMc03104 SMc03103
nitrogen source L-Histidine (N) -0.9 -0.2 N.D. N.D. -0.1
nutrient L-Histidine -0.7 +0.0 N.D. N.D. -0.4
nitrogen source Gly-DL-Asp (N) -0.2 +0.1 N.D. N.D. -0.8
nutrient Min media with glucose -0.5 +0.1 N.D. N.D. -0.5
stress nitrate 40 mM -0.1 -0.6 N.D. N.D. -0.1
nitrogen source L-Asparagine (N) +0.4 -0.3 N.D. N.D. -0.8
lb LB -0.4 +0.1 N.D. N.D. -0.4
carbon source Maltitol (C) -0.2 -0.2 N.D. N.D. -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.2 N.D. N.D. -0.4
stress Nickel (II) chloride 0.5 mM +0.0 -0.4 N.D. N.D. -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.2 N.D. N.D. -0.6
carbon source succinate (C) -0.3 +0.1 N.D. N.D. -0.3
stress Aluminum chloride +0.1 -0.3 N.D. N.D. -0.3
pH LB, pH6 +0.5 -0.3 N.D. N.D. -0.6
stress Chlorite 0.1 mM +0.2 +0.2 N.D. N.D. -0.6
carbon source L-Alanine (C) +0.1 +0.1 N.D. N.D. -0.4
pH LB, pH7 +0.3 +0.0 N.D. N.D. -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +0.3 N.D. N.D. -0.7
stress Paraquat dichloride 0.3 mg/ml +0.5 -0.2 N.D. N.D. -0.1
stress Nickel (II) chloride 1 mM +0.6 -0.4 N.D. N.D. +0.0
nitrogen source L-Leucine (N) -0.2 -0.0 N.D. N.D. +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.1 N.D. N.D. -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.1 N.D. N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.2 N.D. N.D. -0.4
carbon source methyl-beta-D-xylopyranoside (C) +0.3 -0.1 N.D. N.D. +0.4
r2a-hepes control R2A-HEPES control for volatile experiments +0.2 +0.2 N.D. N.D. +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +0.1 N.D. N.D. +0.1
carbon source D-Mannose (C) +0.5 +0.3 N.D. N.D. +0.1
nitrogen source Cytosine (N) +0.2 +0.0 N.D. N.D. +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 -0.0 N.D. N.D. +0.5
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