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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc03106 and SMc03105 are separated by 160 nucleotides
SMc03105 and SMc03104 are separated by 168 nucleotides
SMc03104 and SMc03103 are separated by 345 nucleotides
SMc03103 and SMc03102 are separated by 15 nucleotides
SMc03106: SMc03106 - hypothetical protein, at 3,235,060 to 3,235,785
SMc03106
SMc03105: SMc03105 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase, at 3,235,946 to 3,237,121
SMc03105
SMc03104: SMc03104 - 5-aminolevulinate synthase, at 3,237,290 to 3,238,507
SMc03104
SMc03103: SMc03103 - carbon monoxide dehydrogenase medium subunit transmembrane protein, at 3,238,853 to 3,239,650
SMc03103
SMc03102: SMc03102 - carbon monoxide dehydrogenase large subunit transmembrane protein, at 3,239,666 to 3,242,011
SMc03102
Group
Condition
SMc03106
SMc03105
SMc03104
SMc03103
SMc03102
nitrogen source
L-Asparagine (N)
-0.3
N.D.
N.D.
-0.8
-0.1
stress
nitrate 40 mM
-0.6
N.D.
N.D.
-0.1
-0.2
pH
LB, pH6
-0.3
N.D.
N.D.
-0.6
+0.0
nitrogen source
L-Arginine (N)
-0.6
N.D.
N.D.
-0.0
-0.1
stress
Nickel (II) chloride 0.5 mM
-0.4
N.D.
N.D.
-0.4
-0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
N.D.
N.D.
-0.6
+0.1
nitrogen source
Gly-DL-Asp (N)
+0.1
N.D.
N.D.
-0.8
+0.0
stress
Aluminum chloride
-0.3
N.D.
N.D.
-0.3
-0.0
carbon source
Maltitol (C)
-0.2
N.D.
N.D.
-0.4
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
N.D.
N.D.
-0.4
+0.0
nutrient
Min media with glucose
+0.1
N.D.
N.D.
-0.5
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.3
N.D.
N.D.
-0.7
-0.1
stress
Chlorite 0.1 mM
+0.2
N.D.
N.D.
-0.6
-0.1
carbon source
D-Glucose (C)
-0.1
N.D.
N.D.
-0.4
-0.1
nutrient
L-Histidine
+0.0
N.D.
N.D.
-0.4
-0.1
lb
LB
+0.1
N.D.
N.D.
-0.4
-0.1
nitrogen source
NAG (N)
+0.1
N.D.
N.D.
-0.5
+0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
N.D.
N.D.
-0.3
-0.2
pH
LB, pH7
+0.0
N.D.
N.D.
-0.5
+0.1
carbon source
L-Alanine (C)
+0.1
N.D.
N.D.
-0.4
-0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
N.D.
N.D.
-0.4
-0.1
carbon source
Fumarate (C)
+0.0
N.D.
N.D.
-0.4
+0.1
nitrogen source
L-Leucine (N)
-0.0
N.D.
N.D.
+0.5
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.0
N.D.
N.D.
+0.5
+0.0
carbon source
D-Mannose (C)
+0.3
N.D.
N.D.
+0.1
+0.1
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.2
N.D.
N.D.
+0.3
+0.1
carbon source
D-Mannose (C)
+0.3
N.D.
N.D.
+0.1
+0.1
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.2
N.D.
N.D.
+0.3
+0.2
r2a control
R2A control for volatile experiments
+0.1
N.D.
N.D.
+0.4
+0.2
nitrogen source
Cytosine (N)
+0.0
N.D.
N.D.
+0.8
+0.1
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