Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc05010 and SMc03088 overlap by 73 nucleotidesSMc03088 and SMc03087 are separated by 361 nucleotidesSMc03087 and SMc03086 are separated by 144 nucleotidesSMc03086 and SMc03085 are separated by 17 nucleotides SMc05010: SMc05010 - hypothetical protein, at 3,258,794 to 3,259,279 SMc05010 SMc03088: SMc03088 - transposase ISRM11/ISRM2011-2, at 3,259,207 to 3,259,614 SMc03088 SMc03087: SMc03087 - chemoreceptor methyl-accepting chemotaxis protein, at 3,259,976 to 3,261,757 SMc03087 SMc03086: SMc03086 - NAD-dependent formate dehydrogenase subunit delta, at 3,261,902 to 3,262,135 SMc03086 SMc03085: SMc03085 - formate dehydrogenase accessory protein, at 3,262,153 to 3,263,025 SMc03085
Group Condition SMc05010 SMc03088 SMc03087 SMc03086 SMc03085
nitrogen source L-Leucine (N) N.D. N.D. -0.0 -0.6 -0.2
stress Sisomicin 0.004 mg/ml N.D. N.D. -0.3 -0.0 -0.4
carbon source Lactitol (C) N.D. N.D. +0.3 -0.4 -0.5
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI N.D. N.D. -0.1 -0.5 +0.2
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) N.D. N.D. -0.5 +0.2 -0.1
nitrogen source Cytosine (N) N.D. N.D. +0.1 -0.5 +0.1
carbon source Lactitol (C) N.D. N.D. +0.3 -0.2 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. +0.1 -0.5 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. +0.1 -0.4 +0.4
r2a control R2A control for volatile experiments N.D. N.D. -0.2 +0.4 -0.2
carbon source methyl 3-keto-a-D-glucopyranoside (C) N.D. N.D. -0.1 +0.5 -0.3
nitrogen source L-Arginine (N) N.D. N.D. +0.5 -0.2 -0.1
stress Cisplatin 0.001 mg/ml N.D. N.D. -0.2 +0.0 +0.6
carbon source Methyl beta-D-glucopyranoside (C) N.D. N.D. -0.2 +0.7 -0.1
nitrogen source NAG (N) N.D. N.D. -0.1 +0.6 +0.1
stress Polymyxin B sulfate 0.00005 mg/ml N.D. N.D. -0.5 +0.8 +0.2
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) N.D. N.D. +0.1 +0.6 -0.1
stress Aluminum chloride N.D. N.D. -0.3 +0.6 +0.3
stress Paraquat dichloride 0.2 mg/ml N.D. N.D. +0.3 +0.4 -0.1
r2a control R2A control for volatile experiments N.D. N.D. +0.1 +0.5 +0.1
stress copper (II) chloride 1 mM N.D. N.D. +0.2 +0.4 +0.1
nutrient Min media with glucose N.D. N.D. +0.1 +0.5 +0.1
r2a control R2A control for volatile experiments N.D. N.D. +0.1 +0.4 +0.3
stress D-Cycloserine 0.05 mg/ml N.D. N.D. -0.1 +0.6 +0.2
carbon source L-Lysine (C) N.D. N.D. +0.1 +0.3 +0.3
nutrient L-Lysine N.D. N.D. +0.3 +0.6 -0.0
stress perchlorate 10 mM N.D. N.D. +0.2 +0.3 +0.4
nutrient Min media with glucose N.D. N.D. +0.2 +0.7 +0.1
nutrient L-Lysine N.D. N.D. +0.1 +0.5 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. +0.0 +0.8 +0.2
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