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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc03053 and SMc03054 are separated by 124 nucleotides
SMc03054 and SMc03055 overlap by 4 nucleotides
SMc03055 and SMc03056 are separated by 4 nucleotides
SMc03056 and SMc03071 are separated by 98 nucleotides
SMc03053: SMc03053 - flagellar biosynthesis protein FliQ, at 748,209 to 748,475
SMc03053
SMc03054: SMc03054 - flagellar biosynthesis protein FlhA, at 748,600 to 750,687
SMc03054
SMc03055: SMc03055 - flagellar biosynthesis protein FliR, at 750,684 to 751,436
SMc03055
SMc03056: SMc03056 - hypothetical protein, at 751,441 to 751,854
SMc03056
SMc03071: SMc03071 - hypothetical protein, at 751,953 to 752,507
SMc03071
Group
Condition
SMc03053
SMc03054
SMc03055
SMc03056
SMc03071
nitrogen source
L-Arginine (N)
-3.3
+0.2
-0.4
-0.1
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-3.2
-0.0
-0.2
+0.3
-0.4
carbon source
D-Arabinose (C)
-2.3
-0.1
-0.3
-0.5
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-3.6
-0.1
+0.1
+0.1
+0.1
stress
Cisplatin 0.001 mg/ml
-2.2
-0.3
+0.1
-0.1
-0.4
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.2
-0.6
-0.4
-0.9
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-1.6
-0.6
+0.2
-0.1
+0.0
carbon source
L-Histidine (C)
-1.5
-0.1
-0.1
-0.1
-0.1
stress
Nickel (II) chloride 1 mM
-1.6
-0.1
-0.1
+0.2
-0.3
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-1.4
-0.5
-0.2
-0.5
+0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.7
+0.2
-0.2
-0.7
-0.3
carbon source
D-Xylose (C)
-1.7
-0.1
-0.1
+0.2
-0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.3
+0.2
-0.2
+0.1
-0.4
carbon source
D-Glucose (C)
-0.9
-0.4
-0.1
-0.4
+0.3
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.8
-0.4
-0.4
+0.1
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.4
+0.2
-0.0
-0.2
+0.0
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-1.4
-0.0
+0.0
-0.0
+0.2
nitrogen source
L-Histidine (N)
-1.9
+0.2
-0.1
+0.8
-0.2
nitrogen source
Cytosine (N)
-1.4
+0.2
-0.2
+0.3
+0.0
carbon source
D-Xylose (C)
-1.6
+0.2
+0.1
+0.4
+0.0
stress
Polymyxin B sulfate 0.00005 mg/ml
-1.3
-0.1
-0.3
+0.8
+0.5
nitrogen source
nitrate (N)
-1.3
+0.0
-0.1
+0.5
+0.5
nitrogen source
L-Asparagine (N)
+1.3
-0.3
-0.3
-0.2
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.5
+0.2
+0.4
+0.3
-0.7
nutrient
L-Histidine
+1.2
-0.3
-0.0
+0.0
-0.2
nutrient
Min media with glucose
+1.0
+0.0
+0.1
+0.3
-0.3
stress
Paraquat dichloride 0.2 mg/ml
+1.7
+0.0
-0.0
+0.2
-0.5
dmso control
DMSO control
+1.0
+0.2
+0.1
-0.0
+0.5
stress
Sisomicin 0.004 mg/ml
+1.5
+0.2
-0.1
+0.4
+0.1
stress
Chlorite 0.1 mM
+1.3
+0.3
+0.1
+0.6
+0.1
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