Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc03053 and SMc03054 are separated by 124 nucleotidesSMc03054 and SMc03055 overlap by 4 nucleotidesSMc03055 and SMc03056 are separated by 4 nucleotidesSMc03056 and SMc03071 are separated by 98 nucleotides SMc03053: SMc03053 - flagellar biosynthesis protein FliQ, at 748,209 to 748,475 SMc03053 SMc03054: SMc03054 - flagellar biosynthesis protein FlhA, at 748,600 to 750,687 SMc03054 SMc03055: SMc03055 - flagellar biosynthesis protein FliR, at 750,684 to 751,436 SMc03055 SMc03056: SMc03056 - hypothetical protein, at 751,441 to 751,854 SMc03056 SMc03071: SMc03071 - hypothetical protein, at 751,953 to 752,507 SMc03071
Group Condition SMc03053 SMc03054 SMc03055 SMc03056 SMc03071
nitrogen source L-Arginine (N) -3.3 +0.2 -0.4 -0.1 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -3.2 -0.0 -0.2 +0.3 -0.4
carbon source D-Arabinose (C) -2.3 -0.1 -0.3 -0.5 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.6 -0.1 +0.1 +0.1 +0.1
stress Cisplatin 0.001 mg/ml -2.2 -0.3 +0.1 -0.1 -0.4
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.2 -0.6 -0.4 -0.9 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.6 -0.6 +0.2 -0.1 +0.0
carbon source L-Histidine (C) -1.5 -0.1 -0.1 -0.1 -0.1
stress Nickel (II) chloride 1 mM -1.6 -0.1 -0.1 +0.2 -0.3
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -1.4 -0.5 -0.2 -0.5 +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 +0.2 -0.2 -0.7 -0.3
carbon source D-Xylose (C) -1.7 -0.1 -0.1 +0.2 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 +0.2 -0.2 +0.1 -0.4
carbon source D-Glucose (C) -0.9 -0.4 -0.1 -0.4 +0.3
nitrogen source D-Glucosamine Hydrochloride (N) -0.8 -0.4 -0.4 +0.1 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 +0.2 -0.0 -0.2 +0.0
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM -1.4 -0.0 +0.0 -0.0 +0.2
nitrogen source L-Histidine (N) -1.9 +0.2 -0.1 +0.8 -0.2
nitrogen source Cytosine (N) -1.4 +0.2 -0.2 +0.3 +0.0
carbon source D-Xylose (C) -1.6 +0.2 +0.1 +0.4 +0.0
stress Polymyxin B sulfate 0.00005 mg/ml -1.3 -0.1 -0.3 +0.8 +0.5
nitrogen source nitrate (N) -1.3 +0.0 -0.1 +0.5 +0.5
nitrogen source L-Asparagine (N) +1.3 -0.3 -0.3 -0.2 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.2 +0.4 +0.3 -0.7
nutrient L-Histidine +1.2 -0.3 -0.0 +0.0 -0.2
nutrient Min media with glucose +1.0 +0.0 +0.1 +0.3 -0.3
stress Paraquat dichloride 0.2 mg/ml +1.7 +0.0 -0.0 +0.2 -0.5
dmso control DMSO control +1.0 +0.2 +0.1 -0.0 +0.5
stress Sisomicin 0.004 mg/ml +1.5 +0.2 -0.1 +0.4 +0.1
stress Chlorite 0.1 mM +1.3 +0.3 +0.1 +0.6 +0.1
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