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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc03016 and SMc03017 are separated by 8 nucleotides
SMc03017 and SMc03018 overlap by 4 nucleotides
SMc03018 and SMc03019 are separated by 211 nucleotides
SMc03019 and SMc03020 are separated by 87 nucleotides
SMc03016: SMc03016 - transcriptional regulator, at 714,838 to 715,578
SMc03016
SMc03017: SMc03017 - hypothetical protein, at 715,587 to 716,033
SMc03017
SMc03018: SMc03018 - flagellar biosynthesis protein FlhB, at 716,030 to 717,112
SMc03018
SMc03019: SMc03019 - flagellar motor switch protein G, at 717,324 to 718,361
SMc03019
SMc03020: SMc03020 - flagellar motor switch protein, at 718,449 to 719,081
SMc03020
Group
Condition
SMc03016
SMc03017
SMc03018
SMc03019
SMc03020
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.7
-0.0
-0.4
-0.8
N.D.
nitrogen source
L-Asparagine (N)
-0.5
-0.1
-0.4
-0.5
N.D.
stress
Paraquat dichloride 0.3 mg/ml
-0.3
-0.2
-0.4
-0.1
N.D.
tsb
Day4 TSB
-0.5
+0.2
-0.2
-0.4
N.D.
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.4
-0.3
-0.4
+0.5
N.D.
tsb
Day3 TSB
-0.5
+0.3
-0.2
-0.3
N.D.
tsb
Day1 TSB
-0.5
+0.3
-0.2
-0.2
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.6
-0.2
-0.1
-0.6
N.D.
carbon source
Beta-Lactose (C)
+0.4
-0.4
-0.1
-0.2
N.D.
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.3
-0.8
-0.0
+0.2
N.D.
dmso control
DMSO control
+0.2
-0.5
-0.0
+0.4
N.D.
dmso control
DMSO control
+0.2
-0.4
+0.3
+0.3
N.D.
stress
1-octen-3-ol 0.4933903333 mM
+0.3
-0.4
+0.2
+0.3
N.D.
lb no stress control
LB no stress control
+0.3
-0.4
+0.3
+0.3
N.D.
nitrogen source
Gly-DL-Asp (N)
+0.4
-0.3
-0.0
+0.4
N.D.
dmso control
DMSO control
+0.3
-0.4
+0.3
+0.3
N.D.
lb
LB
+0.5
-0.5
+0.0
+0.6
N.D.
tsb
Day4 LB
+0.5
-0.3
+0.3
+0.3
N.D.
stress
Chlorite 0.1 mM
+1.0
-0.1
-0.2
+0.2
N.D.
nitrogen source
L-Leucine (N)
+0.4
-0.1
-0.0
+0.7
N.D.
stress
copper (II) chloride 1 mM
+1.0
+0.0
-0.3
+0.4
N.D.
stress
Nickel (II) chloride 0.5 mM
+0.7
-0.1
+0.0
+0.5
N.D.
stress
1-octen-3-ol 0.4933903333 mM
+0.2
-0.1
+0.4
+0.5
N.D.
lb
LB
+0.6
-0.3
+0.1
+0.7
N.D.
carbon source
Protocatechuic Acid (C)
+0.4
+0.3
+0.2
+0.4
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.4
+0.2
+0.4
+0.3
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.3
+0.2
+0.6
+0.2
N.D.
pH
LB, pH6
+0.7
+0.0
-0.0
+0.6
N.D.
pH
LB, pH6
+1.0
+0.0
+0.2
+0.4
N.D.
stress
Nickel (II) chloride 1 mM
+1.4
+0.0
-0.0
+0.3
N.D.
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