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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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500 nt
SMc02908 and SMc02909 are separated by 37 nucleotides
SMc02909 and SMc02910 are separated by 207 nucleotides
SMc02910 and SMc02911 are separated by 222 nucleotides
SMc02911 and SMc02912 are separated by 45 nucleotides
SMc02908: SMc02908 - recombination protein RecR, at 263,174 to 263,779
SMc02908
SMc02909: SMc02909 - transglycosylase transmembrane protein, at 263,817 to 265,055
SMc02909
SMc02910: SMc02910 - transport transmembrane protein, at 265,263 to 266,918
SMc02910
SMc02911: SMc02911 - hypothetical protein, at 267,141 to 267,758
SMc02911
SMc02912: SMc02912 - transcription elongation factor NusA, at 267,804 to 269,432
SMc02912
Group
Condition
SMc02908
SMc02909
SMc02910
SMc02911
SMc02912
stress
Cisplatin 0.0005 mg/ml
-4.7
-2.8
+0.3
N.D.
N.D.
stress
Fusidic 0.0001 mg/ml
-0.6
-6.2
+0.1
N.D.
N.D.
stress
Cisplatin 0.001 mg/ml
-3.5
-2.2
+0.2
N.D.
N.D.
nitrogen source
Gelatin (N)
-0.3
-5.1
-0.1
N.D.
N.D.
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.3
-5.1
-0.2
N.D.
N.D.
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-3.9
-1.1
-0.1
N.D.
N.D.
nitrogen source
L-Leucine (N)
-0.4
-4.7
+0.2
N.D.
N.D.
stress
Cobalt chloride 0.16 mM
-0.5
-4.3
+0.1
N.D.
N.D.
stress
Thallium(I) acetate 0.0025 mg/ml
-0.5
-4.1
+0.2
N.D.
N.D.
pH
LB, pH8
+0.2
-4.4
-0.0
N.D.
N.D.
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-3.6
-0.3
-0.2
N.D.
N.D.
stress
Thallium(I) acetate 0.001 mg/ml
-0.0
-4.2
+0.2
N.D.
N.D.
stress
perchlorate 10 mM
-0.1
-3.9
+0.1
N.D.
N.D.
stress
Paraquat dichloride 0.2 mg/ml
+0.3
-4.3
+0.2
N.D.
N.D.
nutrient
Min media with glucose
-0.5
-3.4
+0.0
N.D.
N.D.
temperature
LB, 30C
-0.0
-3.7
-0.1
N.D.
N.D.
pH
LB, pH8
-0.4
-3.4
+0.1
N.D.
N.D.
lb
LB
+0.3
-3.7
-0.2
N.D.
N.D.
stress
Nickel (II) chloride 1 mM
+0.7
-4.2
+0.1
N.D.
N.D.
nitrogen source
nitrate (N)
-0.4
-3.3
+0.2
N.D.
N.D.
stress
A22 0.02 mg/ml
-0.5
-2.9
+0.1
N.D.
N.D.
carbon source
D-Glucose (C)
-0.1
-3.3
+0.0
N.D.
N.D.
temperature
LB, 30C
-0.4
-2.8
-0.2
N.D.
N.D.
stress
Chlorite 0.1 mM
-0.2
-3.1
-0.1
N.D.
N.D.
stress
Sisomicin 0.004 mg/ml
-0.4
-2.9
-0.0
N.D.
N.D.
lb
LB
-0.6
-2.7
+0.1
N.D.
N.D.
lb
LB
-0.3
-2.8
+0.1
N.D.
N.D.
r2a control
R2A control for volatile experiments
+0.2
-3.4
+0.2
N.D.
N.D.
carbon source
succinate (C)
-1.1
-2.0
+0.2
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.2
-1.7
+0.2
N.D.
N.D.
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