Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc02873 and SMc02874 are separated by 55 nucleotidesSMc02874 and SMc02875 are separated by 199 nucleotidesSMc02875 and SMc02876 overlap by 4 nucleotidesSMc02876 and SMc02877 are separated by 93 nucleotides SMc02873: SMc02873 - N-Acetyl-D-glucosamine ABC transport system, periplasmic substrate-binding component (from data), at 228,920 to 230,179 SMc02873 SMc02874: SMc02874 - N-acetylmuramic acid 6-phosphate etherase, at 230,235 to 231,131 SMc02874 SMc02875: SMc02875 - N-acetylglucosamine kinase (EC 2.7.1.59) (from data), at 231,331 to 232,215 SMc02875 SMc02876: SMc02876 - transcriptional regulator, at 232,212 to 232,976 SMc02876 SMc02877: SMc02877 - hypothetical protein, at 233,070 to 234,092 SMc02877
Group Condition SMc02873 SMc02874 SMc02875 SMc02876 SMc02877
carbon source NAG (C) -3.9 -4.5 -5.2 N.D. -7.3
nitrogen source NAG (N) -4.1 -3.9 -3.4 N.D. -5.2
carbon source D-Glucosamine Hydrochloride (C) -0.1 -0.0 -0.6 N.D. -7.4
nitrogen source D-Glucosamine Hydrochloride (N) -0.3 -0.1 -0.7 N.D. -2.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 -0.1 -0.5 N.D. -0.9
nitrogen source L-Asparagine (N) -0.1 -0.7 -0.3 N.D. -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.1 -0.5 -0.2 N.D. -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.1 -0.4 N.D. -0.8
nitrogen source L-Leucine (N) +0.4 -1.2 -0.1 N.D. +0.1
stress Nickel (II) chloride 1 mM +0.4 +0.0 -0.9 N.D. -0.2
nitrogen source Uridine (N) -0.3 -0.6 -0.2 N.D. +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 -0.2 -0.9 N.D. +0.4
carbon source D-Arabinose (C) +0.1 +0.2 -0.3 N.D. -0.5
stress Chloride 200 mM +0.2 -0.4 +0.2 N.D. -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.3 -0.7 N.D. +0.7
stress D-Cycloserine 0.05 mg/ml +0.0 -0.5 -0.1 N.D. +0.5
carbon source Lactitol (C) +0.1 -0.4 -0.5 N.D. +0.6
stress copper (II) chloride 1 mM +0.1 -0.4 -0.3 N.D. +0.5
carbon source Lactulose (C) +0.1 -0.5 -0.2 N.D. +0.6
nitrogen source L-Arginine (N) -0.1 +0.6 -0.6 N.D. +0.5
stress Paraquat dichloride 0.3 mg/ml +0.1 -0.0 -0.3 N.D. +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.8 -0.4 N.D. -0.0
stress Polymyxin B sulfate 0.00005 mg/ml +0.2 +0.4 -0.3 N.D. +0.2
nitrogen source nitrate (N) +0.1 +0.7 +0.1 N.D. -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.8 -0.6 N.D. +0.4
carbon source Beta-Lactose (C) +0.1 +0.3 -0.2 N.D. +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -0.1 -0.2 N.D. +0.8
carbon source D-Glucose (C) +0.3 -0.1 -0.1 N.D. +0.7
r2a control R2A control for volatile experiments +0.1 +0.5 +0.2 N.D. +0.4
carbon source D-Galactose (C) +0.1 +0.5 +0.1 N.D. +0.6
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