Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc02780 and SMc02779 are separated by 195 nucleotidesSMc02779 and SMc02778 are separated by 281 nucleotidesSMc02778 and SMc02777 are separated by 12 nucleotidesSMc02777 and SMc02776 are separated by 167 nucleotides SMc02780: SMc02780 - succinate-semialdehyde dehydrogenase [NADP+] protein, at 11,996 to 13,450 SMc02780 SMc02779: SMc02779 - transposase, at 13,646 to 14,611 SMc02779 SMc02778: SMc02778 - hydroxyacid aldolase, at 14,893 to 15,693 SMc02778 SMc02777: SMc02777 - transcriptional regulator, at 15,706 to 16,584 SMc02777 SMc02776: SMc02776 - D-arabinoate dehydratase (EC 4.2.1.5); also involved in L-fucose catabolism (from data), at 16,752 to 18,257 SMc02776
Group Condition SMc02780 SMc02779 SMc02778 SMc02777 SMc02776
carbon source L-Fucose (C) +0.1 N.D. -0.2 -1.2 -2.8
stress D-Cycloserine 0.05 mg/ml -0.8 N.D. -2.9 -0.3 -0.2
carbon source pipercolic (C) +0.0 N.D. -2.6 -0.6 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 N.D. -2.3 -0.6 +0.1
stress Paraquat dichloride 0.2 mg/ml +0.1 N.D. -2.8 -0.4 +0.0
stress Aluminum chloride +0.2 N.D. -3.0 +0.2 -0.3
lb LB -0.5 N.D. -2.7 +0.1 +0.1
stress Polymyxin B sulfate 0.00005 mg/ml -0.1 N.D. -2.9 +0.3 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 N.D. -2.5 -0.2 +0.1
carbon source D-Arabinose (C) -0.0 N.D. -0.7 +2.4 -4.2
carbon source L-Malic (C) -0.1 N.D. -1.8 -0.4 -0.3
stress perchlorate 10 mM -0.5 N.D. -2.2 +0.3 -0.1
stress Paraquat dichloride 0.3 mg/ml -0.1 N.D. -1.9 -0.3 -0.3
stress copper (II) chloride 1 mM +0.8 N.D. -2.7 -0.5 -0.0
nitrogen source L-Asparagine (N) -0.5 N.D. -2.1 +0.1 +0.1
nitrogen source L-Arginine (N) +0.3 N.D. -1.6 -0.1 -1.0
carbon source Fumarate (C) -0.1 N.D. -2.1 -0.2 +0.2
lb LB -0.2 N.D. -2.1 +0.0 +0.1
pH LB, pH8 -0.7 N.D. -1.7 +0.4 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 N.D. -2.3 +0.4 +0.1
carbon source Methyl beta-D-glucopyranoside (C) +0.6 N.D. -0.3 -1.5 -0.0
carbon source Methyl beta-D-glucopyranoside (C) +0.1 N.D. +0.6 -1.9 -0.0
stress Chlorite 0.1 mM +0.3 N.D. -1.8 +0.3 -0.1
carbon source D-Ribose (C) -0.2 N.D. -1.2 +0.8 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 N.D. -1.3 -0.7 +0.9
nitrogen source D-Glucosamine Hydrochloride (N) -0.6 N.D. +1.1 +0.5 -0.3
nitrogen source L-Histidine (N) -0.1 N.D. +1.6 +0.4 -0.3
nitrogen source Cytosine (N) -0.7 N.D. +1.2 +1.1 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 N.D. +1.8 -0.4 +0.3
nitrogen source nitrate (N) +0.1 N.D. +1.1 +1.1 -0.2
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