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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc02701 and SMc02702 overlap by 4 nucleotides
SMc02702 and SMc02703 are separated by 298 nucleotides
SMc02703 and SMc02704 are separated by 3 nucleotides
SMc02704 and SMc02705 overlap by 4 nucleotides
SMc02701: SMc02701 - hypothetical protein, at 2,549,297 to 2,549,929
SMc02701
SMc02702: SMc02702 - hypothetical protein, at 2,549,926 to 2,550,609
SMc02702
SMc02703: SMc02703 - hypothetical protein, at 2,550,908 to 2,551,921
SMc02703
SMc02704: SMc02704 - hypothetical protein, at 2,551,925 to 2,552,845
SMc02704
SMc02705: SMc02705 - hypothetical protein, at 2,552,842 to 2,555,655
SMc02705
Group
Condition
SMc02701
SMc02702
SMc02703
SMc02704
SMc02705
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.0
-0.6
N.D.
N.D.
N.D.
carbon source
Myristic (C)
-0.0
-1.2
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.6
-0.6
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.7
-0.5
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.6
-0.5
N.D.
N.D.
N.D.
carbon source
Myristic (C)
-0.0
-1.0
N.D.
N.D.
N.D.
carbon source
L-Leucine (C)
-0.3
-0.7
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.6
-0.3
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.5
-0.3
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
-0.4
N.D.
N.D.
N.D.
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.4
-0.3
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
-0.4
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.6
-0.2
N.D.
N.D.
N.D.
stress
copper (II) chloride 1 mM
-0.4
-0.3
N.D.
N.D.
N.D.
nutrient
L-Lysine
-0.3
-0.4
N.D.
N.D.
N.D.
stress
Cisplatin 0.0005 mg/ml
-0.1
-0.6
N.D.
N.D.
N.D.
pH
LB, pH8
-0.3
-0.4
N.D.
N.D.
N.D.
carbon source
NAG (C)
-0.4
-0.2
N.D.
N.D.
N.D.
pH
LB, pH6
-0.3
-0.4
N.D.
N.D.
N.D.
lb
LB
-0.4
-0.2
N.D.
N.D.
N.D.
nutrient
L-Histidine
-0.5
-0.1
N.D.
N.D.
N.D.
pH
LB, pH8
-0.2
-0.4
N.D.
N.D.
N.D.
carbon source
palatinose (C)
-0.4
-0.3
N.D.
N.D.
N.D.
stress
Nickel (II) chloride 1 mM
-0.4
-0.3
N.D.
N.D.
N.D.
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.2
-0.4
N.D.
N.D.
N.D.
carbon source
D-Salicin (C)
-0.5
-0.1
N.D.
N.D.
N.D.
carbon source
D-Arabinose (C)
-0.5
-0.1
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
-0.3
N.D.
N.D.
N.D.
stress
copper (II) chloride 1 mM
+0.2
-0.5
N.D.
N.D.
N.D.
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.3
-0.5
N.D.
N.D.
N.D.
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