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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc02603 and SMc02601 are separated by 182 nucleotides
SMc02601 and SMc02599 are separated by 49 nucleotides
SMc02599 and SMc02598 are separated by 49 nucleotides
SMc02598 and SMc02597 are separated by 103 nucleotides
SMc02603: SMc02603 - transport transmembrane protein, at 1,192,189 to 1,193,427
SMc02603
SMc02601: SMc02601 - quinolinate synthetase, at 1,193,610 to 1,194,689
SMc02601
SMc02599: SMc02599 - L-aspartate oxidase, at 1,194,739 to 1,196,337
SMc02599
SMc02598: SMc02598 - nicotinate-nucleotide pyrophosphorylase carboxylating protein, at 1,196,387 to 1,197,286
SMc02598
SMc02597: SMc02597 - superoxide dismutase Cu-Zn precursor (bacteriocuprein) transmembrane protein, at 1,197,390 to 1,197,908
SMc02597
Group
Condition
SMc02603
SMc02601
SMc02599
SMc02598
SMc02597
nitrogen source
NAG (N)
-0.0
-0.7
-0.5
-0.5
-0.1
carbon source
D-Arabinose (C)
-0.1
-0.7
-0.2
-0.2
-0.1
stress
copper (II) chloride 1 mM
-0.3
-0.0
-0.2
-0.6
-0.1
nutrient
L-Histidine
-0.0
-0.3
-0.4
-0.4
+0.2
nutrient
Min media with glucose
+0.0
-0.4
-0.1
-0.6
+0.1
carbon source
Maltitol (C)
+0.1
-0.6
-0.4
-0.2
+0.1
nitrogen source
nitrate (N)
-0.1
-0.6
-0.4
+0.2
-0.1
carbon source
Maltitol (C)
+0.1
-0.4
-0.4
-0.2
+0.0
carbon source
L-Lysine (C)
+0.1
-0.3
-0.0
-0.3
-0.1
pH
LB, pH6
+0.2
-0.2
-0.2
-0.5
+0.1
stress
Nickel (II) chloride 1 mM
-0.1
-0.2
-0.4
+0.3
-0.1
carbon source
D-Cellobiose (C)
-0.3
-0.2
-0.1
+0.3
-0.0
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.1
-0.4
-0.1
-0.1
+0.3
dmso control
DMSO control
+0.1
-0.3
+0.2
+0.1
-0.4
stress
Chlorite 0.1 mM
+0.3
+0.2
-0.1
-0.3
-0.1
r2a control
R2A control for volatile experiments
-0.2
+0.0
+0.2
-0.3
+0.2
carbon source
D-Glucose (C)
+0.2
-0.2
-0.2
-0.1
+0.2
carbon source
pipercolic (C)
-0.1
-0.2
-0.0
+0.5
-0.2
lb
LB
+0.1
+0.2
-0.2
-0.3
+0.3
stress
nitrate 40 mM
-0.2
+0.1
-0.3
+0.1
+0.5
stress
1-octen-3-ol 0.4933903333 mM
-0.3
-0.1
+0.3
+0.1
+0.1
carbon source
Protocatechuic Acid (C)
+0.2
+0.1
+0.2
-0.4
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
-0.2
+0.4
+0.3
+0.1
nitrogen source
L-Leucine (N)
-0.1
+0.3
-0.2
+0.2
+0.2
stress
Aluminum chloride
-0.3
+0.1
+0.5
+0.1
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
+0.4
+0.4
-0.5
+0.4
carbon source
acetate (C)
-0.1
+0.1
+0.3
+0.2
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.0
+0.1
+0.2
+0.6
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+0.0
+0.2
+0.3
+0.3
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+0.3
+0.5
+0.2
+0.2
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