Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc02660 and SMc02565 are separated by 173 nucleotidesSMc02565 and SMc02561 overlap by 47 nucleotidesSMc02561 and SMc02559 are separated by 2 nucleotidesSMc02559 and SMc02558 overlap by 4 nucleotides SMc02660: SMc02660 - toxin-activating lysine-acyltransferase, at 1,201,811 to 1,202,308 SMc02660 SMc02565: SMc02565 - hypothetical protein, at 1,202,482 to 1,203,486 SMc02565 SMc02561: SMc02561 - hypothetical protein, at 1,203,440 to 1,203,973 SMc02561 SMc02559: SMc02559 - hypothetical protein, at 1,203,976 to 1,204,584 SMc02559 SMc02558: SMc02558 - hypothetical protein, at 1,204,581 to 1,205,423 SMc02558
Group Condition SMc02660 SMc02565 SMc02561 SMc02559 SMc02558
dmso control DMSO control -0.2 -0.1 -3.2 -0.1 -1.7
lb no stress control LB no stress control -0.1 -0.6 -2.5 -0.3 -1.1
carbon source acetate (C) +0.0 -1.2 -1.6 -0.3 -1.0
lb no stress control LB no stress control +0.2 -0.1 -2.1 -0.2 -1.5
dmso control DMSO control -0.3 -0.3 -1.6 -0.4 -0.9
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.6 +0.3 -3.0 -0.7 -0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.1 -2.1 -0.0 -1.2
dmso control DMSO control -0.3 -0.0 -1.6 -0.0 -1.5
lb no stress control LB no stress control -0.1 -0.2 -2.0 -0.2 -0.9
stress 1-octen-3-ol 0.5427293333 mM +0.1 -0.2 -1.7 -0.4 -1.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.3 -2.6 -0.5 -0.2
r2a-hepes control R2A-HEPES control for volatile experiments -0.4 +0.3 -1.4 -0.0 -1.1
nitrogen source Uridine (N) +0.3 +0.4 +0.1 +0.3 -3.6
nitrogen source L-Asparagine (N) -0.6 +0.5 -1.0 -0.1 -1.2
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.7 +0.1 -1.6 -0.9 -0.0
stress Chlorite 0.1 mM +0.1 +0.9 -1.2 +0.1 +1.4
stress Polymyxin B sulfate 0.00005 mg/ml +0.6 +0.5 -0.7 -0.4 +1.7
pH LB, pH8 +0.2 +0.3 -0.6 +0.2 +3.0
stress copper (II) chloride 1 mM -0.1 +1.1 +0.8 +0.2 +1.1
stress nitrate 40 mM +0.2 +0.9 +0.9 -0.1 +1.3
pH LB, pH8 +0.1 +0.3 +0.0 +0.3 +3.0
stress Nickel (II) chloride 1 mM +0.3 +1.3 +0.2 +0.4 +1.5
pH LB, pH6 +0.3 +1.3 +0.9 +0.3 +1.3
stress Paraquat dichloride 0.05 mg/ml +0.1 +0.4 -0.3 +0.1 +3.9
pH LB, pH6 +0.3 +1.1 +1.3 +0.5 +1.5
stress D-Cycloserine 0.05 mg/ml -0.1 +0.5 +0.8 +0.3 +3.1
lb LB +0.1 +0.7 -0.5 +0.5 +4.4
lb LB -0.0 +0.6 +0.8 -0.1 +4.3
lb LB -0.3 +0.6 +0.1 +0.0 +5.8
stress perchlorate 10 mM -0.1 +1.2 +0.2 +0.2 +4.9
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