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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc02556 and SMc02555 are separated by 158 nucleotides
SMc02555 and SMc02554 overlap by 4 nucleotides
SMc02554 and SMc02553 overlap by 2 nucleotides
SMc02553 and SMc02552 are separated by 186 nucleotides
SMc02556: SMc02556 - hypothetical protein, at 1,206,297 to 1,206,566
SMc02556
SMc02555: SMc02555 - signal peptide protein, at 1,206,725 to 1,207,168
SMc02555
SMc02554: SMc02554 - hypothetical protein, at 1,207,165 to 1,207,629
SMc02554
SMc02553: SMc02553 - hypothetical protein, at 1,207,628 to 1,208,458
SMc02553
SMc02552: SMc02552 - hypothetical protein, at 1,208,645 to 1,208,794
SMc02552
Group
Condition
SMc02556
SMc02555
SMc02554
SMc02553
SMc02552
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
+0.1
-0.9
N.D.
stress
Nickel (II) chloride 1 mM
N.D.
N.D.
-0.7
-0.1
N.D.
pH
LB, pH6
N.D.
N.D.
-0.4
-0.3
N.D.
carbon source
Maltitol (C)
N.D.
N.D.
-0.4
-0.4
N.D.
stress
copper (II) chloride 1 mM
N.D.
N.D.
-0.5
-0.3
N.D.
stress
3-octanone 2.655166667 mM
N.D.
N.D.
-0.2
-0.5
N.D.
stress
Chloride 200 mM
N.D.
N.D.
-0.4
-0.3
N.D.
carbon source
D-Xylose (C)
N.D.
N.D.
-0.2
-0.5
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
-0.7
+0.3
N.D.
carbon source
D-Glucose (C)
N.D.
N.D.
-0.5
+0.3
N.D.
stress
3-octanone 0.456 mM
N.D.
N.D.
+0.4
-0.6
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
N.D.
N.D.
+0.4
-0.6
N.D.
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
N.D.
N.D.
+0.4
-0.3
N.D.
stress
3-octanone 0.456 mM
N.D.
N.D.
-0.3
+0.5
N.D.
r2a-hepes control
R2A-HEPES control for volatile experiments
N.D.
N.D.
+0.5
-0.2
N.D.
r2a-hepes control
R2A-HEPES control for volatile experiments
N.D.
N.D.
+0.6
-0.1
N.D.
stress
Cisplatin 0.0005 mg/ml
N.D.
N.D.
+0.0
+0.7
N.D.
stress
copper (II) chloride 1 mM
N.D.
N.D.
+0.8
-0.1
N.D.
r2a-hepes control
R2A-HEPES control for volatile experiments
N.D.
N.D.
+0.4
+0.4
N.D.
stress
Paraquat dichloride 0.2 mg/ml
N.D.
N.D.
+0.4
+0.4
N.D.
stress
Paraquat dichloride 0.2 mg/ml
N.D.
N.D.
+0.4
+0.4
N.D.
stress
D-Cycloserine 0.05 mg/ml
N.D.
N.D.
+0.7
+0.2
N.D.
stress
Cobalt chloride 0.16 mM
N.D.
N.D.
+0.9
+0.1
N.D.
stress
Thallium(I) acetate 0.001 mg/ml
N.D.
N.D.
+0.6
+0.4
N.D.
lb
LB
N.D.
N.D.
+0.7
+0.5
N.D.
lb
LB
N.D.
N.D.
+1.0
+0.2
N.D.
stress
Nickel (II) chloride 0.5 mM
N.D.
N.D.
+0.6
+0.6
N.D.
lb
LB
N.D.
N.D.
+0.8
+0.5
N.D.
stress
Thallium(I) acetate 0.0025 mg/ml
N.D.
N.D.
+0.7
+0.6
N.D.
stress
Aluminum chloride
N.D.
N.D.
+1.1
+0.5
N.D.
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