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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc02546 and SMc02545 are separated by 213 nucleotides
SMc02545 and SMc02544 are separated by 71 nucleotides
SMc02544 and SMc02543 are separated by 242 nucleotides
SMc02543 and SMc00550 are separated by 197 nucleotides
SMc02546: SMc02546 - alpha-isopropylmalate/homocitrate synthase family transferase, at 1,213,129 to 1,214,745
SMc02546
SMc02545: SMc02545 - hypothetical protein, at 1,214,959 to 1,215,900
SMc02545
SMc02544: SMc02544 - hypothetical protein, at 1,215,972 to 1,216,589
SMc02544
SMc02543: SMc02543 - hypothetical protein, at 1,216,832 to 1,218,541
SMc02543
SMc00550: SMc00550 - ABC transporter ATP-binding protein, at 1,218,739 to 1,220,622
SMc00550
Group
Condition
SMc02546
SMc02545
SMc02544
SMc02543
SMc00550
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
-0.3
-4.2
-1.4
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
+0.1
-4.2
-1.1
-0.1
nitrogen source
Gelatin (N)
-0.1
+0.0
-4.8
-0.5
-0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
-0.2
-2.6
-1.7
-0.6
stress
Fusidic 0.0001 mg/ml
+0.1
+0.2
-1.6
-3.4
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
-0.2
-1.3
-1.5
-1.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
-0.2
-1.0
-2.0
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
-0.1
-0.3
-2.7
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
-0.2
-1.1
-1.3
-0.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
-0.4
-0.5
-1.5
-0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
-0.3
-1.1
-0.4
-0.8
nitrogen source
L-Leucine (N)
-0.5
-0.0
-1.8
-0.7
+0.1
carbon source
Lactulose (C)
+0.1
+0.0
-2.0
-0.6
-0.1
stress
copper (II) chloride 1 mM
+0.1
-0.1
-1.1
-1.8
+0.2
nitrogen source
L-Arginine (N)
-0.1
-0.3
-0.4
-1.9
+0.1
stress
Aluminum chloride
-0.5
+0.2
-0.9
-1.1
-0.0
stress
Cobalt chloride 0.16 mM
+0.0
+0.1
-0.6
-1.5
-0.3
carbon source
Maltitol (C)
-0.3
-0.1
-0.5
-1.4
+0.1
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
+0.1
-0.2
-0.8
-1.2
-0.1
stress
perchlorate 10 mM
-0.2
+0.0
-2.1
+0.1
+0.1
stress
Cisplatin 0.0005 mg/ml
+0.1
+0.0
-1.4
-0.7
-0.2
pH
LB, pH8
+0.0
+0.3
-1.1
-0.4
-0.7
nutrient
L-Lysine
-0.7
+0.1
+0.5
-1.3
-0.1
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.1
+0.3
+0.5
-1.0
-0.5
stress
Sisomicin 0.004 mg/ml
+0.3
+0.2
+0.5
-1.0
-0.7
nutrient
L-Lysine
-0.5
-0.0
+1.1
-0.8
-0.2
nutrient
Min media with glucose
+0.1
+0.1
+1.0
-1.4
-0.1
stress
Nickel (II) chloride 1 mM
+0.3
+0.5
+1.1
-1.7
-0.3
nitrogen source
L-Histidine (N)
-0.0
-0.1
+1.4
-0.7
-0.4
lb no stress control
LB no stress control
+0.0
-0.3
+1.4
-0.5
-0.1
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