Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc02523 and SMc02522 are separated by 157 nucleotidesSMc02522 and SMc02521 are separated by 167 nucleotidesSMc02521 and SMc02520 are separated by 130 nucleotidesSMc02520 and SMc02519 are separated by 38 nucleotides SMc02523: SMc02523 - transcriptional regulator, at 3,268,382 to 3,269,278 SMc02523 SMc02522: SMc02522 - oxidoreductase, at 3,269,436 to 3,270,206 SMc02522 SMc02521: SMc02521 - glycerol-3-phosphate regulon repressor transcription regulator protein, at 3,270,374 to 3,271,138 SMc02521 SMc02520: SMc02520 - glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data), at 3,271,269 to 3,272,780 SMc02520 SMc02519: SMc02519 - ABC transporter ATP-binding protein, at 3,272,819 to 3,273,889 SMc02519
Group Condition SMc02523 SMc02522 SMc02521 SMc02520 SMc02519
stress Sisomicin 0.004 mg/ml -0.1 -0.2 -0.5 -4.1 +0.3
carbon source Glycerol (C) +0.1 +0.1 +0.1 -5.0 +0.3
stress Fusidic 0.0001 mg/ml -0.1 -0.2 +0.4 -4.1 +0.4
nitrogen source L-Asparagine (N) -0.3 -0.2 -3.1 +0.7 +0.3
stress Nickel (II) chloride 1 mM -0.4 +0.9 +0.1 -3.1 -0.1
carbon source pipercolic (C) -0.0 +0.0 -2.1 +0.0 -0.3
stress Cobalt chloride 0.16 mM -0.0 +0.0 -0.1 -2.1 +0.1
r2a control R2A control for volatile experiments -0.1 -0.2 -0.4 -1.1 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -0.0 +0.8 -2.0 -0.3
carbon source Xylobiose (C) -0.1 +0.1 -1.4 -0.2 -0.2
carbon source Lactitol (C) -0.2 +0.1 -1.4 -0.4 +0.2
stress A22 0.02 mg/ml +0.0 +0.1 -0.2 -1.8 +0.3
stress nitrite 20 mM -0.2 -0.0 -0.3 -1.3 +0.2
carbon source methyl-beta-D-xylopyranoside (C) +0.1 +0.1 -1.6 -0.2 +0.1
carbon source L-Histidine (C) +0.1 +0.1 -1.7 +0.4 -0.0
nitrogen source L-Arginine (N) -0.2 -0.1 -1.2 +0.7 -0.3
nitrogen source L-Serine (N) +0.2 +0.0 -1.4 +0.3 +0.2
r2a control R2A control for volatile experiments +0.3 -0.3 +0.5 -1.2 +0.0
nitrogen source L-Glutamine (N) +0.1 +0.2 -1.4 +0.6 +0.0
nitrogen source Gly-DL-Asp (N) +0.3 +0.1 -1.3 +0.4 +0.1
stress Polymyxin B sulfate 0.00005 mg/ml -0.1 -0.0 -1.6 +1.0 +0.3
nutrient L-Lysine +0.2 -0.1 -0.7 +0.6 +0.4
stress Chloride 200 mM -0.5 -0.3 -0.2 +1.6 +0.1
nitrogen source Gelatin (N) +0.2 +0.3 -0.7 +0.6 +0.3
tsb Day4 LB -0.1 +0.1 +1.3 -0.8 +0.3
stress nitrate 40 mM -0.0 +0.0 -0.2 +1.6 +0.4
pH LB, pH8 -0.1 +0.2 +0.4 +0.8 +0.7
lb LB -0.0 -0.1 +0.7 +1.6 +0.3
lb LB +0.0 +0.4 +0.5 +1.5 +0.2
stress perchlorate 10 mM -0.1 +0.7 -0.0 +3.6 +0.2
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