Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc02335 and SMc02336 are separated by 30 nucleotidesSMc02336 and SMc02452 are separated by 219 nucleotidesSMc02452 and SMc02337 overlap by 4 nucleotidesSMc02337 and SMc02338 are separated by 49 nucleotides SMc02335: SMc02335 - pentose kinase, at 2,754,193 to 2,755,722 SMc02335 SMc02336: SMc02336 - oxidoreductase, at 2,755,753 to 2,756,511 SMc02336 SMc02452: SMc02452 - ABC transporter permease, at 2,756,731 to 2,757,708 SMc02452 SMc02337: SMc02337 - ABC transporter ATP-binding protein, at 2,757,705 to 2,759,210 SMc02337 SMc02338: SMc02338 - periplasmic binding ABC transporter protein, at 2,759,260 to 2,760,225 SMc02338
Group Condition SMc02335 SMc02336 SMc02452 SMc02337 SMc02338
nitrogen source L-Asparagine (N) -0.7 -0.4 -0.3 -0.7 -2.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.1 -0.4 +0.4 -4.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.1 +0.0 +0.1 -2.9
r2a-hepes control R2A-HEPES control for volatile experiments -0.2 -0.1 -0.1 -0.4 -1.7
carbon source Lactitol (C) +0.0 -0.0 -0.1 -0.0 -1.5
nitrogen source L-Histidine (N) +0.2 +0.0 +0.1 -0.3 -1.6
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.2 -1.0 -0.3 -0.5 +0.5
stress Chlorite 0.1 mM -0.1 -0.0 -0.3 +0.1 -1.1
carbon source D-Trehalose (C) +0.0 -0.2 +0.1 +0.1 -1.4
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.1 -0.1 +0.1 -0.5 -0.8
r2a-hepes control R2A-HEPES control for volatile experiments -0.1 +0.1 +0.1 -0.6 -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 +0.0 -0.3 +0.2 -1.0
carbon source Methyl beta-D-glucopyranoside (C) +0.1 -0.1 -0.4 -0.1 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 +0.1 -0.7 +0.3 -0.9
pH LB, pH6 -0.2 +0.2 +0.0 +0.1 -1.4
nutrient Min media with glucose -0.3 -0.3 +0.1 +0.2 -0.8
stress Paraquat dichloride 0.2 mg/ml +0.4 -0.4 +0.1 -0.1 -1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.1 +0.0 -0.5 -0.9
lb LB -0.0 -0.1 +0.2 +0.1 -1.2
nitrogen source L-Leucine (N) +0.0 +0.4 +0.2 -0.6 -0.7
stress Nickel (II) chloride 1 mM +0.1 +0.2 +0.2 -0.4 -0.7
stress Thallium(I) acetate 0.0025 mg/ml -0.1 +0.2 -0.0 +0.6 -0.8
nitrogen source Gelatin (N) -0.1 -0.1 -0.0 -0.5 +0.9
nitrogen source nitrate (N) -0.3 +0.2 -0.2 -0.1 +0.9
r2a control R2A control for volatile experiments +0.2 -0.3 -0.4 +0.2 +1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.1 +0.3 +0.2 -0.9 +1.2
carbon source Fumarate (C) +0.2 -0.3 -0.2 +0.3 +0.9
carbon source L-Leucine (C) +0.3 +0.1 -0.2 -0.1 +0.7
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM -0.1 -0.0 +0.1 +0.1 +1.2
r2a control R2A control for volatile experiments +0.2 +0.1 +0.1 +0.1 +1.3
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