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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc02368 and SMc02369 are separated by 10 nucleotides
SMc02369 and SMc02370 are separated by 362 nucleotides
SMc02370 and SMc02371 are separated by 425 nucleotides
SMc02371 and SMc02372 are separated by 9 nucleotides
SMc02368: SMc02368 - bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase, at 1,116,048 to 1,119,008
SMc02368
SMc02369: SMc02369 - sensor histidine kinase transmembrane protein, at 1,119,019 to 1,121,337
SMc02369
SMc02370: SMc02370 - aminopeptidase N, at 1,121,700 to 1,124,354
SMc02370
SMc02371: SMc02371 - hypothetical protein, at 1,124,780 to 1,125,718
SMc02371
SMc02372: SMc02372 - transport transmembrane protein, at 1,125,728 to 1,127,017
SMc02372
Group
Condition
SMc02368
SMc02369
SMc02370
SMc02371
SMc02372
stress
Nickel (II) chloride 1 mM
-0.9
N.D.
-1.9
-0.1
-0.2
carbon source
L-Glutamine (C)
-1.2
N.D.
+0.1
+0.1
+0.0
stress
Sisomicin 0.004 mg/ml
-0.6
N.D.
-0.1
-0.2
-0.2
carbon source
L-Histidine (C)
-1.0
N.D.
+0.2
-0.1
-0.0
pH
LB, pH8
-1.2
N.D.
+0.2
-0.1
+0.2
nitrogen source
Gelatin (N)
-0.5
N.D.
+0.1
-0.0
-0.2
carbon source
L-Proline (C)
-0.8
N.D.
+0.2
-0.1
+0.0
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.3
N.D.
+0.0
-0.6
-0.1
pH
LB, pH8
-1.0
N.D.
+0.2
+0.2
+0.2
stress
Aluminum chloride
-0.4
N.D.
+0.4
-0.2
-0.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.4
N.D.
+0.1
-0.5
-0.3
stress
Nickel (II) chloride 0.5 mM
-0.4
N.D.
+0.3
-0.1
-0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
N.D.
+0.0
+0.2
-0.4
stress
Fusidic 0.0001 mg/ml
-0.5
N.D.
+0.1
+0.2
-0.0
carbon source
L-Alanine (C)
-0.3
N.D.
+0.3
-0.0
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.4
N.D.
+0.0
+0.4
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.4
N.D.
+0.0
+0.3
-0.0
carbon source
acetate (C)
-0.5
N.D.
+0.2
+0.2
+0.0
nitrogen source
L-Histidine (N)
-0.4
N.D.
+0.2
+0.3
-0.1
carbon source
L-Alanine (C)
-0.4
N.D.
+0.3
+0.0
+0.1
nitrogen source
L-Leucine (N)
+0.0
N.D.
+0.2
+0.4
-0.3
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.4
N.D.
+0.3
+0.2
+0.3
stress
copper (II) chloride 1 mM
-0.1
N.D.
+0.3
+0.3
+0.0
carbon source
D-Glucose (C)
+0.4
N.D.
+0.1
+0.2
-0.1
carbon source
D-Glucosamine Hydrochloride (C)
+0.6
N.D.
+0.2
+0.0
-0.0
carbon source
succinate (C)
+0.2
N.D.
+0.1
+0.2
+0.3
carbon source
D-Ribose (C)
+0.7
N.D.
+0.2
+0.0
-0.0
carbon source
Myristic (C)
+0.6
N.D.
+0.3
+0.0
+0.0
carbon source
Uridine (C)
+0.5
N.D.
+0.3
+0.1
+0.2
carbon source
Myristic (C)
+0.6
N.D.
+0.4
+0.0
+0.2
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