Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc02278 and SMc02279 are separated by 330 nucleotidesSMc02279 and SMc02280 are separated by 52 nucleotidesSMc02280 and SMc02281 overlap by 4 nucleotidesSMc02281 and SMc02282 are separated by 14 nucleotides SMc02278: SMc02278 - hypothetical protein, at 652,438 to 652,590 SMc02278 SMc02279: SMc02279 - signal peptide protein, at 652,921 to 653,298 SMc02279 SMc02280: SMc02280 - hypothetical protein, at 653,351 to 653,620 SMc02280 SMc02281: SMc02281 - hypothetical protein, at 653,617 to 655,062 SMc02281 SMc02282: SMc02282 - copper-containing oxidoreductase, at 655,077 to 656,426 SMc02282
Group Condition SMc02278 SMc02279 SMc02280 SMc02281 SMc02282
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.3 -4.2 +0.1 +0.1
nitrogen source D-Glucosamine Hydrochloride (N) N.D. +0.1 -3.4 -0.6 -0.2
nitrogen source L-Asparagine (N) N.D. -0.5 -3.6 +0.1 +0.1
r2a control R2A control for volatile experiments N.D. -1.2 -2.0 -0.2 -0.2
nitrogen source Uridine (N) N.D. -0.5 -2.6 -0.1 +0.0
carbon source succinate (C) N.D. +0.1 -2.9 +0.0 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.3 -2.2 -0.7 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.7 -1.2 -0.4 -0.0
carbon source pipercolic (C) N.D. -0.1 -2.2 +0.1 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.0 -2.0 +0.1 -0.1
stress copper (II) chloride 1 mM N.D. -0.1 -2.1 +0.1 +0.2
stress Thallium(I) acetate 0.001 mg/ml N.D. -0.6 -1.5 +0.1 +0.1
carbon source D-Mannitol (C) N.D. -0.1 -1.6 -0.0 -0.1
r2a-hepes control R2A-HEPES control for volatile experiments N.D. -0.2 -1.8 +0.1 +0.1
carbon source 5-Aminovaleric (C) N.D. +0.1 -2.1 +0.1 +0.2
carbon source succinate (C) N.D. -0.3 -1.3 -0.1 -0.1
carbon source D-Xylose (C) N.D. -0.3 -1.5 +0.3 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.1 -1.5 -0.1 +0.1
stress Polymyxin B sulfate 0.00005 mg/ml N.D. -0.2 -1.0 +0.3 -0.4
pH LB, pH6 N.D. +0.2 -0.9 -0.5 +0.0
carbon source Protocatechuic Acid (C) N.D. +0.2 -1.2 +0.1 -0.2
carbon source pipercolic (C) N.D. +0.4 -1.5 +0.2 -0.2
carbon source L-Alanine (C) N.D. -0.1 -1.3 +0.3 +0.1
stress Aluminum chloride N.D. -0.6 -0.8 +0.3 +0.2
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI N.D. -0.0 -1.3 +0.5 +0.0
nitrogen source L-Arginine (N) N.D. -0.7 +1.5 -0.5 -0.2
pH LB, pH6 N.D. -0.7 +1.3 -0.0 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. -0.6 +1.7 -0.3 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.0 +1.8 +0.0 -0.3
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) N.D. +0.2 +1.4 +0.2 +0.1
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