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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc02273 and SMc02274 are separated by 367 nucleotides
SMc02274 and SMc02275 are separated by 309 nucleotides
SMc02275 and SMc02276 are separated by 116 nucleotides
SMc02276 and SMc02277 are separated by 135 nucleotides
SMc02273: SMc02273 - fatty acid synthase transmembrane protein, at 640,572 to 648,086
SMc02273
SMc02274: SMc02274 - capsule polysaccharide exporter protein, at 648,454 to 649,677
SMc02274
SMc02275: SMc02275 - pyrazinamidase/nicotinamidase (Includes: pyrazinamidase, nicotinamidase) protein, at 649,987 to 650,622
SMc02275
SMc02276: SMc02276 - nicotinate phosphoribosyltransferase, at 650,739 to 652,043
SMc02276
SMc02277: SMc02277 - hypothetical protein, at 652,179 to 652,391
SMc02277
Group
Condition
SMc02273
SMc02274
SMc02275
SMc02276
SMc02277
carbon source
Myristic (C)
-1.9
N.D.
-0.3
-0.1
N.D.
carbon source
Myristic (C)
-1.6
N.D.
-0.2
-0.2
N.D.
stress
Nickel (II) chloride 1 mM
+0.1
N.D.
-1.0
-0.9
N.D.
carbon source
Protocatechuic Acid (C)
-0.0
N.D.
-0.2
-1.0
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
N.D.
+0.1
-0.9
N.D.
stress
nitrate 40 mM
+0.5
N.D.
+0.2
-0.7
N.D.
stress
Paraquat dichloride 0.3 mg/ml
+0.9
N.D.
+0.0
-0.6
N.D.
stress
Cisplatin 0.001 mg/ml
+0.9
N.D.
+0.4
-0.9
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.1
N.D.
+1.0
-0.2
N.D.
stress
Polymyxin B sulfate 0.00005 mg/ml
+1.2
N.D.
-0.5
+0.0
N.D.
stress
Paraquat dichloride 0.2 mg/ml
+1.0
N.D.
+0.2
-0.3
N.D.
stress
perchlorate 10 mM
+1.1
N.D.
+0.2
-0.1
N.D.
stress
Thallium(I) acetate 0.001 mg/ml
+1.0
N.D.
+0.3
-0.2
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.1
N.D.
-0.1
+0.1
N.D.
stress
Cisplatin 0.0005 mg/ml
+0.9
N.D.
+0.7
-0.4
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.2
N.D.
+0.3
-0.2
N.D.
stress
Paraquat dichloride 0.2 mg/ml
+1.3
N.D.
+0.1
+0.1
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.0
N.D.
+0.2
+0.2
N.D.
nitrogen source
L-Glutamine (N)
+0.6
N.D.
+0.7
+0.1
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.1
N.D.
-0.1
+0.4
N.D.
nitrogen source
L-Asparagine (N)
+0.9
N.D.
+0.5
+0.1
N.D.
lb
LB
+1.1
N.D.
+0.3
+0.1
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.2
N.D.
+0.1
+0.3
N.D.
stress
Cobalt chloride 0.16 mM
+2.3
N.D.
-0.5
-0.2
N.D.
pH
LB, pH8
+1.6
N.D.
+0.1
+0.0
N.D.
nitrogen source
L-Arginine (N)
+1.5
N.D.
+0.0
+0.2
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.8
N.D.
+0.9
+0.1
N.D.
pH
LB, pH8
+1.6
N.D.
-0.1
+0.4
N.D.
lb
LB
+1.9
N.D.
-0.1
+0.1
N.D.
lb
LB
+1.8
N.D.
+0.3
-0.0
N.D.
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