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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc02272 and SMc02273 overlap by 4 nucleotides
SMc02273 and SMc02274 are separated by 367 nucleotides
SMc02274 and SMc02275 are separated by 309 nucleotides
SMc02275 and SMc02276 are separated by 116 nucleotides
SMc02272: SMc02272 - acyl-transferase transferase, at 639,160 to 640,575
SMc02272
SMc02273: SMc02273 - fatty acid synthase transmembrane protein, at 640,572 to 648,086
SMc02273
SMc02274: SMc02274 - capsule polysaccharide exporter protein, at 648,454 to 649,677
SMc02274
SMc02275: SMc02275 - pyrazinamidase/nicotinamidase (Includes: pyrazinamidase, nicotinamidase) protein, at 649,987 to 650,622
SMc02275
SMc02276: SMc02276 - nicotinate phosphoribosyltransferase, at 650,739 to 652,043
SMc02276
Group
Condition
SMc02272
SMc02273
SMc02274
SMc02275
SMc02276
carbon source
Myristic (C)
-2.0
-1.9
N.D.
-0.3
-0.1
carbon source
Myristic (C)
-1.9
-1.6
N.D.
-0.2
-0.2
stress
Nickel (II) chloride 1 mM
-0.0
+0.1
N.D.
-1.0
-0.9
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.5
-0.3
N.D.
+0.1
-0.9
stress
Paraquat dichloride 0.3 mg/ml
+0.6
+0.9
N.D.
+0.0
-0.6
stress
Cisplatin 0.001 mg/ml
+0.7
+0.9
N.D.
+0.4
-0.9
stress
D-Cycloserine 0.05 mg/ml
+0.8
+0.7
N.D.
+0.3
-0.1
stress
Polymyxin B sulfate 0.00005 mg/ml
+1.0
+1.2
N.D.
-0.5
+0.0
stress
Paraquat dichloride 0.05 mg/ml
+0.8
+0.9
N.D.
+0.1
-0.1
stress
Paraquat dichloride 0.2 mg/ml
+0.8
+1.0
N.D.
+0.2
-0.3
stress
Thallium(I) acetate 0.001 mg/ml
+0.6
+1.0
N.D.
+0.3
-0.2
stress
A22 0.02 mg/ml
+1.3
+0.8
N.D.
-0.1
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.8
+1.1
N.D.
-0.1
+0.1
stress
Cisplatin 0.0005 mg/ml
+0.9
+0.9
N.D.
+0.7
-0.4
nitrogen source
L-Glutamine (N)
+0.7
+0.6
N.D.
+0.7
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.8
+1.1
N.D.
-0.1
+0.4
stress
perchlorate 10 mM
+1.1
+1.1
N.D.
+0.2
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.8
+1.0
N.D.
+0.2
+0.2
lb
LB
+0.8
+1.1
N.D.
+0.3
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.1
+1.2
N.D.
+0.3
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.6
+0.8
N.D.
+0.9
+0.1
stress
Paraquat dichloride 0.2 mg/ml
+1.2
+1.3
N.D.
+0.1
+0.1
nitrogen source
L-Asparagine (N)
+1.2
+0.9
N.D.
+0.5
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.0
+1.2
N.D.
+0.1
+0.3
nitrogen source
L-Arginine (N)
+1.8
+1.5
N.D.
+0.0
+0.2
pH
LB, pH8
+2.2
+1.6
N.D.
+0.1
+0.0
lb
LB
+1.7
+1.8
N.D.
+0.3
-0.0
lb
LB
+1.9
+1.9
N.D.
-0.1
+0.1
stress
Cobalt chloride 0.16 mM
+2.4
+2.3
N.D.
-0.5
-0.2
pH
LB, pH8
+2.2
+1.6
N.D.
-0.1
+0.4
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