Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc02260 and SMc02261 are separated by 189 nucleotidesSMc02261 and SMc02262 are separated by 23 nucleotidesSMc02262 and SMc02263 overlap by 4 nucleotidesSMc02263 and SMc02264 are separated by 189 nucleotides SMc02260: SMc02260 - ABC transporter ATP-binding protein, at 624,952 to 625,806 SMc02260 SMc02261: SMc02261 - transcriptional regulator, at 625,996 to 626,610 SMc02261 SMc02262: SMc02262 - aminotransferase, at 626,634 to 627,824 SMc02262 SMc02263: SMc02263 - hypothetical protein, at 627,821 to 629,434 SMc02263 SMc02264: SMc02264 - hypothetical protein, at 629,624 to 630,016 SMc02264
Group Condition SMc02260 SMc02261 SMc02262 SMc02263 SMc02264
stress Polymyxin B sulfate 0.00005 mg/ml -2.1 -0.5 +0.2 -0.3 N.D.
stress Chlorite 0.1 mM -1.4 -0.5 +0.1 -0.6 N.D.
nitrogen source Gelatin (N) -1.6 -0.8 +0.2 -0.1 N.D.
stress nitrate 40 mM -1.6 +0.2 -0.1 -0.5 N.D.
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.0 -1.7 +0.1 -0.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -0.1 +0.2 -0.5 N.D.
carbon source D-Trehalose (C) -1.6 -0.1 +0.0 +0.2 N.D.
carbon source 5-Aminovaleric (C) -1.4 -0.2 +0.1 +0.2 N.D.
temperature LB, 23C -1.4 +0.2 -0.2 +0.1 N.D.
carbon source acetate (C) -0.7 -0.9 +0.0 +0.4 N.D.
carbon source Sucrose (C) -0.8 -0.7 +0.1 +0.2 N.D.
carbon source D-Xylose (C) -1.0 -0.4 -0.1 +0.3 N.D.
nitrogen source L-Arginine (N) -1.5 -0.3 +0.1 +0.6 N.D.
stress Sisomicin 0.004 mg/ml -1.0 -0.3 -0.1 +0.3 N.D.
stress Cisplatin 0.001 mg/ml -1.9 +0.1 +0.2 +0.6 N.D.
carbon source Maltitol (C) -1.4 +0.4 -0.1 +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.4 -1.8 -0.1 -0.1 N.D.
nitrogen source L-Asparagine (N) -1.3 +0.6 -0.2 +0.3 N.D.
stress copper (II) chloride 1 mM -0.5 -0.6 -0.0 +0.6 N.D.
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) +0.4 -0.8 -0.2 +0.1 N.D.
stress Nickel (II) chloride 1 mM -0.9 +0.4 +0.3 +0.2 N.D.
carbon source Myristic (C) +0.9 -0.7 +0.3 -0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 -0.2 -0.0 -0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 -0.6 -0.1 +0.4 N.D.
carbon source L-Histidine (C) -0.5 +1.1 +0.1 +0.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +0.4 +0.3 -0.3 N.D.
nitrogen source L-Leucine (N) +0.3 +1.0 +0.3 -0.2 N.D.
r2a control R2A control for volatile experiments +0.8 +0.5 +0.0 +0.3 N.D.
carbon source L-Lysine (C) +0.4 +1.1 -0.0 +0.1 N.D.
carbon source L-Lysine (C) +0.8 +0.9 +0.1 +0.1 N.D.
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