Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc02251 and SMc02252 are separated by 180 nucleotidesSMc02252 and SMc02253 are separated by 18 nucleotidesSMc02253 and SMc02254 are separated by 234 nucleotidesSMc02254 and SMc02255 overlap by 11 nucleotides SMc02251: SMc02251 - aspartate aminotransferase, at 615,760 to 616,926 SMc02251 SMc02252: SMc02252 - UDP-glucose 4-epimerase, at 617,107 to 618,135 SMc02252 SMc02253: SMc02253 - salicylate biosynthesis protein, at 618,154 to 618,459 SMc02253 SMc02254: SMc02254 - quinol oxidase subunit II transmembrane protein, at 618,694 to 619,698 SMc02254 SMc02255: SMc02255 - quinol oxidase subunit I transmembrane protein, at 619,688 to 621,169 SMc02255
Group Condition SMc02251 SMc02252 SMc02253 SMc02254 SMc02255
carbon source pipercolic (C) +0.3 -0.2 -2.3 N.D. N.D.
stress Cisplatin 0.0005 mg/ml -0.0 -0.2 -0.9 N.D. N.D.
carbon source Myristic (C) -0.2 +0.2 -1.1 N.D. N.D.
carbon source D,L-Lactate (C) -0.0 -0.1 -0.9 N.D. N.D.
nitrogen source D-Glucosamine Hydrochloride (N) +0.2 +0.1 -1.4 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -0.1 +0.1 N.D. N.D.
stress Thallium(I) acetate 0.001 mg/ml -0.2 -0.3 -0.6 N.D. N.D.
carbon source Myristic (C) +0.0 +0.1 -1.1 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -0.3 -0.0 N.D. N.D.
carbon source pipercolic (C) +0.0 +0.2 -1.2 N.D. N.D.
stress Paraquat dichloride 0.2 mg/ml -0.1 -0.4 -0.4 N.D. N.D.
carbon source L-Fucose (C) -0.0 +0.1 -0.8 N.D. N.D.
carbon source pyruvate (C) -0.2 +0.1 -0.6 N.D. N.D.
nutrient Min media with glucose -0.0 +0.2 -0.8 N.D. N.D.
carbon source L-Malic (C) +0.0 +0.1 -0.7 N.D. N.D.
carbon source L-Lactate (C) -0.1 +0.2 -0.6 N.D. N.D.
stress Chlorite 0.1 mM +0.2 -0.0 -0.7 N.D. N.D.
carbon source L-Lysine (C) -0.2 +0.2 -0.4 N.D. N.D.
stress Nickel (II) chloride 1 mM +0.3 -0.2 -0.5 N.D. N.D.
pH LB, pH6 -0.5 -0.1 +0.2 N.D. N.D.
carbon source D-Xylose (C) -0.2 +0.3 -0.4 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 -0.1 -0.5 N.D. N.D.
stress Paraquat dichloride 0.2 mg/ml -0.0 +0.3 -0.5 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 -0.5 +0.5 N.D. N.D.
nutrient L-Lysine +0.2 +0.3 -0.4 N.D. N.D.
nitrogen source L-Arginine (N) +0.5 -0.6 +0.2 N.D. N.D.
nitrogen source L-Asparagine (N) +0.1 -0.2 +0.6 N.D. N.D.
stress Polymyxin B sulfate 0.00005 mg/ml +0.1 +0.2 +0.6 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 -0.0 +0.4 N.D. N.D.
r2a control R2A control for volatile experiments +0.5 +0.1 +0.5 N.D. N.D.
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