Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc01702 and SMc01701 are separated by 88 nucleotidesSMc01701 and SMc02181 are separated by 249 nucleotidesSMc02181 and SMc02180 are separated by 186 nucleotidesSMc02180 and SMc02179 are separated by 58 nucleotides SMc01702: SMc01702 - oxidoreductase, at 509,911 to 510,897 SMc01702 SMc01701: SMc01701 - hypothetical protein, at 510,986 to 511,570 SMc01701 SMc02181: SMc02181 - bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase, at 511,820 to 515,521 SMc02181 SMc02180: SMc02180 - hypothetical protein, at 515,708 to 516,022 SMc02180 SMc02179: SMc02179 - hypothetical protein, at 516,081 to 516,887 SMc02179
Group Condition SMc01702 SMc01701 SMc02181 SMc02180 SMc02179
carbon source L-Proline (C) -0.0 +0.1 -5.7 +0.4 +0.1
nitrogen source L-Leucine (N) -0.1 -1.7 +0.7 -0.2 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -0.9 -0.0 +0.3 -0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.3 -0.5 +0.2 -0.4 -0.1
stress Sisomicin 0.004 mg/ml +0.0 -1.4 +0.3 +0.1 -0.1
carbon source L-Leucine (C) +0.0 +0.5 -1.6 +0.2 +0.0
stress copper (II) chloride 1 mM +0.2 -1.1 -0.1 +0.1 -0.0
stress Chlorite 0.1 mM -0.3 -1.0 +0.3 +0.1 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.4 -0.2 +0.2 -0.6
pH LB, pH6 -0.0 -0.4 -0.5 +0.5 -0.1
carbon source L-Fucose (C) -0.3 +0.5 -0.2 +0.0 -0.4
stress Thallium(I) acetate 0.0025 mg/ml -0.1 -0.3 +0.6 -0.2 -0.3
stress 3-octanone 2.655166667 mM +0.1 +0.5 -0.4 -0.3 +0.0
stress Aluminum chloride -0.1 -0.8 +0.9 +0.1 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -0.5 +0.3 +0.7 +0.0
lb LB +0.1 -0.8 +0.9 +0.1 -0.1
nitrogen source L-Arginine (N) -0.2 +0.2 +0.7 -0.2 -0.2
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM +0.1 +0.6 -0.5 +0.1 -0.0
stress D-Cycloserine 0.05 mg/ml +0.0 -1.1 +1.2 +0.2 -0.1
stress perchlorate 10 mM -0.1 -0.1 +0.7 +0.3 -0.3
stress 6-Pentyl-2H-pyran-2-one 0.4557668333 mM -0.2 +1.0 -0.2 +0.1 -0.0
stress Paraquat dichloride 0.05 mg/ml -0.1 -0.2 +0.8 +0.3 -0.0
r2a control R2A control for volatile experiments -0.0 +0.9 -0.3 +0.0 +0.3
pH LB, pH8 +0.1 +0.6 +0.5 +0.1 -0.3
lb LB -0.2 +0.4 +1.0 -0.0 -0.3
stress Polymyxin B sulfate 0.00005 mg/ml -0.1 -0.5 +1.2 -0.0 +0.5
nitrogen source L-Asparagine (N) -0.1 +0.9 +0.4 +0.1 -0.1
nitrogen source L-Serine (N) +0.3 +0.8 +0.3 -0.2 +0.1
lb LB +0.2 +0.3 +1.1 +0.0 -0.2
r2a control R2A control +0.2 +1.0 -0.0 +0.3 -0.0
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