Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc02162 and SMc02161 are separated by 337 nucleotidesSMc02161 and SMc02160 are separated by 59 nucleotidesSMc02160 and SMc02159 are separated by 95 nucleotidesSMc02159 and SMc02158 overlap by 4 nucleotides SMc02162: SMc02162 - long-chain-fatty-acid--CoA ligase, at 532,686 to 534,386 SMc02162 SMc02161: SMc02161 - transport transmembrane protein, at 534,724 to 535,959 SMc02161 SMc02160: SMc02160 - ABC transporter permease, at 536,019 to 537,329 SMc02160 SMc02159: SMc02159 - hypothetical protein, at 537,425 to 538,090 SMc02159 SMc02158: SMc02158 - acyltransferase, at 538,087 to 538,698 SMc02158
Group Condition SMc02162 SMc02161 SMc02160 SMc02159 SMc02158
carbon source Myristic (C) -5.4 +0.3 N.D. -0.4 -0.2
carbon source Myristic (C) -5.3 +0.1 N.D. -0.3 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.2 N.D. -1.9 -0.0
stress Chlorite 0.1 mM -0.9 +0.2 N.D. -0.8 +0.3
carbon source L-Histidine (C) -0.3 -0.5 N.D. -0.2 +0.1
pH LB, pH6 -0.8 +0.2 N.D. -0.5 +0.4
carbon source acetate (C) -0.1 +0.3 N.D. +0.1 -0.6
stress 6-Pentyl-2H-pyran-2-one 0.4557668333 mM -0.1 -0.6 N.D. +0.2 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.0 N.D. -0.7 +0.6
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.3 -0.5 N.D. +0.3 +0.0
nitrogen source L-Asparagine (N) -0.2 -0.3 N.D. +0.2 +0.4
pH LB, pH6 -0.7 +0.5 N.D. +0.1 +0.3
nitrogen source Cytosine (N) +0.3 -0.6 N.D. +0.1 +0.5
stress Cisplatin 0.0005 mg/ml +0.2 -0.2 N.D. +0.5 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.3 N.D. +0.7 -0.1
stress Paraquat dichloride 0.2 mg/ml +0.3 -0.2 N.D. +0.4 -0.1
stress Paraquat dichloride 0.05 mg/ml +0.3 +0.5 N.D. +0.1 -0.4
carbon source Glycerol (C) +1.0 -0.2 N.D. -0.0 -0.1
lb LB +0.0 +0.7 N.D. -0.2 +0.1
carbon source pipercolic (C) -0.1 +0.5 N.D. -0.1 +0.4
carbon source L-Alanine (C) -0.1 +1.3 N.D. -0.3 -0.3
carbon source L-Alanine (C) -0.2 +0.8 N.D. -0.2 +0.2
stress A22 0.02 mg/ml +0.7 +0.2 N.D. -0.2 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2 +0.3 N.D. +0.5 -0.2
carbon source Methyl beta-D-glucopyranoside (C) -0.2 +0.3 N.D. +0.4 +0.4
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.1 +0.5 N.D. +0.3 +0.4
stress Thallium(I) acetate 0.0025 mg/ml +0.4 +0.6 N.D. +0.1 +0.0
stress copper (II) chloride 1 mM +0.0 +0.7 N.D. +0.4 +0.0
pH LB, pH8 +0.9 +0.3 N.D. -0.1 +0.3
pH LB, pH8 +1.0 +0.4 N.D. +0.0 +0.1
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