Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc02119 and SMc02118 are separated by 104 nucleotidesSMc02118 and SMc02117 are separated by 337 nucleotidesSMc02117 and SMc02116 are separated by 54 nucleotidesSMc02116 and SMc02115 are separated by 27 nucleotides SMc02119: SMc02119 - ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, permease component 1 (from data), at 1,590,785 to 1,591,978 SMc02119 SMc02118: SMc02118 - ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, periplasmic substrate-binding component (from data), at 1,592,083 to 1,593,108 SMc02118 SMc02117: SMc02117 - cystathionine beta-lyase, at 1,593,446 to 1,594,633 SMc02117 SMc02116: SMc02116 - salicylate hydroxylase, at 1,594,688 to 1,595,851 SMc02116 SMc02115: SMc02115 - hypothetical protein, at 1,595,879 to 1,596,124 SMc02115
Group Condition SMc02119 SMc02118 SMc02117 SMc02116 SMc02115
carbon source L-Glutamine (C) -2.9 -2.9 +0.4 N.D. -2.9
carbon source L-Histidine (C) -2.4 -2.6 +0.5 N.D. -1.7
stress Cisplatin 0.0005 mg/ml -0.1 -0.6 -0.2 N.D. -4.6
nutrient L-Histidine -0.2 -0.2 -0.1 N.D. -4.9
stress Polymyxin B sulfate 0.00005 mg/ml -0.2 +0.0 +0.3 N.D. -5.0
carbon source L-Alanine (C) -1.5 -1.7 +0.6 N.D. -2.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 -0.4 +0.2 N.D. -4.1
nitrogen source D-Glucosamine Hydrochloride (N) +0.1 -0.0 -0.0 N.D. -4.5
stress Nickel (II) chloride 0.5 mM -0.0 -0.0 +0.0 N.D. -4.3
stress Cobalt chloride 0.16 mM -0.0 -0.2 +0.0 N.D. -4.1
carbon source D-Mannose (C) +0.2 +0.2 -0.1 N.D. -4.5
lb LB -0.1 -0.4 +0.1 N.D. -3.9
nutrient L-Histidine -0.1 -0.2 -0.2 N.D. -3.7
carbon source L-Lysine (C) -0.8 -0.9 -0.3 N.D. -2.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.1 +0.1 N.D. -4.0
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.1 -0.2 +0.0 N.D. -3.7
stress Paraquat dichloride 0.3 mg/ml -0.3 -0.2 -0.1 N.D. -3.3
stress A22 0.02 mg/ml -0.2 -0.5 +0.0 N.D. -3.2
carbon source L-Lysine (C) -0.8 -0.7 -0.2 N.D. -2.0
r2a control R2A control for volatile experiments -0.1 +0.1 -0.2 N.D. -3.4
carbon source pipercolic (C) -0.2 -0.4 -0.7 N.D. -2.1
stress Thallium(I) acetate 0.001 mg/ml -0.2 -0.1 -0.0 N.D. -3.1
r2a-hepes control R2A-HEPES control for volatile experiments -0.0 -0.5 +0.0 N.D. -2.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.1 -0.2 +0.2 N.D. -3.3
carbon source D-Tagatose (C) +0.0 +0.2 -0.3 N.D. -3.1
temperature LB, 23C -0.2 -0.3 +0.2 N.D. -2.9
temperature LB, 23C -0.0 -0.2 +0.2 N.D. -3.0
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.1 +0.2 -0.1 N.D. -3.0
pH LB, pH7 +0.0 +0.1 +0.1 N.D. -3.0
carbon source L-Alanine (C) -1.7 -1.2 +0.7 N.D. +0.7
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