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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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500 nt
SMc02125 and SMc02050 are separated by 175 nucleotides
SMc02050 and SMc02049 are separated by 286 nucleotides
SMc02049 and SMc02048 overlap by 1 nucleotides
SMc02048 and SMc02047 are separated by 16 nucleotides
SMc02125: SMc02125 - tRNA-Leu, at 1,668,357 to 1,668,441
SMc02125
SMc02050: SMc02050 - trigger factor, at 1,668,617 to 1,670,092
SMc02050
SMc02049: SMc02049 - glycine dehydrogenase, at 1,670,379 to 1,673,243
SMc02049
SMc02048: SMc02048 - glycine cleavage system protein H, at 1,673,243 to 1,673,605
SMc02048
SMc02047: SMc02047 - glycine cleavage system aminomethyltransferase T, at 1,673,622 to 1,674,761
SMc02047
Group
Condition
SMc02125
SMc02050
SMc02049
SMc02048
SMc02047
carbon source
L-Lysine (C)
N.D.
-1.6
-6.1
-11.0
-6.0
carbon source
L-Lysine (C)
N.D.
-1.4
-5.1
-4.5
-5.8
carbon source
pipercolic (C)
N.D.
-0.7
-4.9
-5.2
-5.9
carbon source
L-Lysine (C)
N.D.
-1.0
-4.9
-4.7
-5.3
carbon source
5-Aminovaleric (C)
N.D.
-0.2
-4.3
-4.8
-5.3
carbon source
pipercolic (C)
N.D.
-0.3
-4.2
-4.9
-4.8
nitrogen source
Gly-DL-Asp (N)
N.D.
-0.6
-4.1
-4.6
-4.1
carbon source
L-Proline (C)
N.D.
-1.0
-4.2
-4.3
-3.8
carbon source
5-Aminovaleric (C)
N.D.
-0.5
-3.6
-3.8
-3.1
carbon source
L-Leucine (C)
N.D.
-1.5
-1.9
-1.8
-2.1
carbon source
acetate (C)
N.D.
-0.4
-2.1
-2.2
-2.4
carbon source
Myristic (C)
N.D.
-2.3
-1.1
-1.5
-1.6
carbon source
acetate (C)
N.D.
-0.3
-2.0
-2.4
-1.7
carbon source
Lactitol (C)
N.D.
-0.7
-1.2
-2.1
-2.4
carbon source
Lactitol (C)
N.D.
-0.9
-1.3
-1.8
-2.0
carbon source
Protocatechuic Acid (C)
N.D.
-2.3
-1.0
-1.4
-0.9
carbon source
Myristic (C)
N.D.
-1.1
-1.2
-1.2
-1.6
carbon source
L-Glutamine (C)
N.D.
-0.7
-1.2
-1.5
-1.0
nitrogen source
L-Glutamine (N)
N.D.
-0.9
-1.2
-1.3
-0.8
carbon source
L-Arabinose (C)
N.D.
+0.1
-1.4
-1.2
-1.7
carbon source
Xylobiose (C)
N.D.
-0.9
-1.0
-1.0
-1.2
carbon source
Uridine (C)
N.D.
-1.5
-0.8
-0.8
-0.7
carbon source
methyl-beta-D-xylopyranoside (C)
N.D.
-1.0
-1.4
-1.3
-0.2
carbon source
L-Arabinose (C)
N.D.
+0.2
-0.9
-1.5
-1.0
lb
LB
N.D.
+3.2
-0.1
-0.2
+0.1
lb
LB
N.D.
+3.7
-0.0
-0.3
-0.2
stress
D-Cycloserine 0.05 mg/ml
N.D.
+3.7
-0.0
-0.1
+0.1
stress
Paraquat dichloride 0.05 mg/ml
N.D.
+3.9
-0.1
+0.1
-0.1
lb
LB
N.D.
+5.0
-0.0
-0.3
-0.1
stress
Paraquat dichloride 0.2 mg/ml
N.D.
+5.1
+0.0
-0.1
+0.4
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