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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc02036 and SMc02037 are separated by 241 nucleotides
SMc02037 and SMc02038 are separated by 35 nucleotides
SMc02038 and SMc02039 are separated by 17 nucleotides
SMc02039 and SMc02040 overlap by 403 nucleotides
SMc02036: SMc02036 - transcriptional regulator, at 2,742,563 to 2,743,270
SMc02036
SMc02037: SMc02037 - oxidoreductase, at 2,743,512 to 2,744,282
SMc02037
SMc02038: SMc02038 - glycerol dehydrogenase, at 2,744,318 to 2,745,412
SMc02038
SMc02039: SMc02039 - oxidoreductase, at 2,745,430 to 2,746,128
SMc02039
SMc02040: SMc02040 - oxidoreductase, at 2,745,726 to 2,746,157
SMc02040
Group
Condition
SMc02036
SMc02037
SMc02038
SMc02039
SMc02040
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-2.0
-0.3
-0.3
-0.3
N.D.
carbon source
Lactitol (C)
-1.7
-0.4
-0.1
-0.1
N.D.
carbon source
D-Mannose (C)
-0.8
-0.3
-0.1
-0.5
N.D.
r2a control
R2A control for volatile experiments
-1.0
-0.2
+0.0
-0.5
N.D.
stress
Chloride 200 mM
-0.8
-0.3
-0.2
-0.3
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.0
-0.4
-0.7
-0.3
N.D.
nitrogen source
L-Arginine (N)
-0.6
-0.3
+0.2
-0.6
N.D.
carbon source
acetate (C)
-0.6
-0.4
+0.1
-0.3
N.D.
carbon source
acetate (C)
-0.9
+0.0
+0.1
-0.3
N.D.
nitrogen source
nitrate (N)
-0.7
+0.3
+0.4
-0.9
N.D.
carbon source
L-Lysine (C)
+0.1
-0.4
+0.1
-0.7
N.D.
nitrogen source
L-Leucine (N)
-0.2
-0.7
-0.5
+0.5
N.D.
pH
LB, pH7
-0.9
-0.2
-0.1
+0.5
N.D.
carbon source
D-Xylose (C)
+0.3
-0.4
-0.2
-0.5
N.D.
carbon source
D-Mannitol (C)
-0.6
-0.4
+0.4
-0.1
N.D.
lb
LB
+0.4
+0.0
+0.2
-1.0
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.9
-0.1
-0.3
-0.6
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
+0.4
-0.3
-0.4
N.D.
stress
Thallium(I) acetate 0.0025 mg/ml
-0.9
+0.5
+0.3
+0.3
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+1.1
+0.1
-0.6
-0.1
N.D.
nutrient
Min media with glucose
+0.3
-0.4
+0.3
+0.3
N.D.
nitrogen source
Cytosine (N)
-0.3
-0.1
+0.5
+0.5
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+0.8
+0.4
-0.2
N.D.
carbon source
Sucrose (C)
+0.6
-0.2
+0.4
+0.2
N.D.
stress
Chlorite 0.1 mM
+1.0
-0.1
+0.4
-0.2
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.6
+1.0
+1.1
-1.5
N.D.
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
+1.0
-0.0
+0.2
+0.1
N.D.
nitrogen source
L-Asparagine (N)
+1.0
+0.2
+0.0
+0.2
N.D.
stress
copper (II) chloride 1 mM
+1.4
+0.2
-0.1
-0.0
N.D.
stress
Polymyxin B sulfate 0.00005 mg/ml
+1.0
-0.5
+0.7
+0.3
N.D.
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