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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc02025 and SMc02026 are separated by 23 nucleotides
SMc02026 and SMc02027 are separated by 28 nucleotides
SMc02027 and SMc02028 overlap by 4 nucleotides
SMc02028 and SMc02029 overlap by 4 nucleotides
SMc02025: SMc02025 - dipeptide-binding periplasmic protein, at 2,728,713 to 2,730,257
SMc02025
SMc02026: SMc02026 - beta-lactamase precursor protein, at 2,730,281 to 2,731,117
SMc02026
SMc02027: SMc02027 - peptide ABC transporter ATP-binding protein, at 2,731,146 to 2,732,774
SMc02027
SMc02028: SMc02028 - peptide ABC transporter permease, at 2,732,771 to 2,733,589
SMc02028
SMc02029: SMc02029 - peptide ABC transporter permease, at 2,733,586 to 2,734,530
SMc02029
Group
Condition
SMc02025
SMc02026
SMc02027
SMc02028
SMc02029
nitrogen source
L-Arginine (N)
+0.2
-0.1
+0.1
-0.5
-2.1
stress
copper (II) chloride 1 mM
-0.1
-0.3
-0.2
-0.7
-0.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.0
-0.2
-0.1
-0.6
-0.4
stress
3-octanone 5.310333333 mM
+0.0
-0.4
-0.1
-0.3
-0.4
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.2
-0.1
-0.0
-0.5
-0.4
stress
3-octanone 2.655166667 mM
+0.0
-0.1
-0.3
-0.3
-0.5
pH
LB, pH6
-0.1
-0.1
-0.0
-0.2
-0.6
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
+0.1
+0.0
-0.2
-0.5
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.3
-0.5
+0.0
-0.3
+0.2
carbon source
D-Mannitol (C)
+0.0
-0.3
+0.0
-0.3
-0.5
stress
1-octen-3-ol 0.4933903333 mM
+0.1
-0.1
-0.1
-0.2
-0.5
dmso control
DMSO control
+0.1
-0.5
-0.1
-0.1
-0.3
stress
3-octanone 0.456 mM
+0.1
-0.4
-0.2
-0.2
-0.1
stress
Thallium(I) acetate 0.0025 mg/ml
+0.1
+0.1
-0.0
-0.3
-0.6
stress
Nickel (II) chloride 1 mM
-0.0
-0.2
+0.3
-0.3
-0.6
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
+0.2
-0.3
-0.1
-0.2
-0.3
nitrogen source
Gelatin (N)
-0.0
-0.2
-0.3
+0.3
-0.5
carbon source
NAG (C)
-0.1
-0.1
-0.4
-0.1
+0.4
nitrogen source
L-Asparagine (N)
+0.1
-0.7
+0.1
+0.3
-0.0
stress
Cisplatin 0.001 mg/ml
-0.0
+0.2
-0.3
+0.2
-0.2
stress
Chlorite 0.1 mM
+0.0
+0.0
+0.2
-0.5
+0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.0
-0.5
+0.2
+0.3
+0.1
nitrogen source
Gly-DL-Asp (N)
+0.1
-0.3
-0.0
+0.6
-0.2
nitrogen source
NAG (N)
+0.1
-0.3
-0.2
+0.4
+0.1
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.1
-0.0
+0.4
+0.3
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
-0.2
+0.3
-0.2
+0.4
nitrogen source
Cytosine (N)
-0.0
-0.4
-0.4
+1.0
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
-0.4
+0.1
-0.1
+1.0
stress
copper (II) chloride 1 mM
-0.1
-0.1
+0.1
+0.2
+0.8
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
-0.1
+0.1
-0.0
+0.5
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