Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc02025 and SMc02026 are separated by 23 nucleotidesSMc02026 and SMc02027 are separated by 28 nucleotidesSMc02027 and SMc02028 overlap by 4 nucleotidesSMc02028 and SMc02029 overlap by 4 nucleotides SMc02025: SMc02025 - dipeptide-binding periplasmic protein, at 2,728,713 to 2,730,257 SMc02025 SMc02026: SMc02026 - beta-lactamase precursor protein, at 2,730,281 to 2,731,117 SMc02026 SMc02027: SMc02027 - peptide ABC transporter ATP-binding protein, at 2,731,146 to 2,732,774 SMc02027 SMc02028: SMc02028 - peptide ABC transporter permease, at 2,732,771 to 2,733,589 SMc02028 SMc02029: SMc02029 - peptide ABC transporter permease, at 2,733,586 to 2,734,530 SMc02029
Group Condition SMc02025 SMc02026 SMc02027 SMc02028 SMc02029
nitrogen source L-Arginine (N) +0.2 -0.1 +0.1 -0.5 -2.1
stress copper (II) chloride 1 mM -0.1 -0.3 -0.2 -0.7 -0.2
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.0 -0.2 -0.1 -0.6 -0.4
stress 3-octanone 5.310333333 mM +0.0 -0.4 -0.1 -0.3 -0.4
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.2 -0.1 -0.0 -0.5 -0.4
stress 3-octanone 2.655166667 mM +0.0 -0.1 -0.3 -0.3 -0.5
pH LB, pH6 -0.1 -0.1 -0.0 -0.2 -0.6
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM +0.1 +0.0 -0.2 -0.5 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -0.5 +0.0 -0.3 +0.2
carbon source D-Mannitol (C) +0.0 -0.3 +0.0 -0.3 -0.5
stress 1-octen-3-ol 0.4933903333 mM +0.1 -0.1 -0.1 -0.2 -0.5
dmso control DMSO control +0.1 -0.5 -0.1 -0.1 -0.3
stress 3-octanone 0.456 mM +0.1 -0.4 -0.2 -0.2 -0.1
stress Thallium(I) acetate 0.0025 mg/ml +0.1 +0.1 -0.0 -0.3 -0.6
stress Nickel (II) chloride 1 mM -0.0 -0.2 +0.3 -0.3 -0.6
stress 6-Pentyl-2H-pyran-2-one 0.4177863333 mM +0.2 -0.3 -0.1 -0.2 -0.3
nitrogen source Gelatin (N) -0.0 -0.2 -0.3 +0.3 -0.5
carbon source NAG (C) -0.1 -0.1 -0.4 -0.1 +0.4
nitrogen source L-Asparagine (N) +0.1 -0.7 +0.1 +0.3 -0.0
stress Cisplatin 0.001 mg/ml -0.0 +0.2 -0.3 +0.2 -0.2
stress Chlorite 0.1 mM +0.0 +0.0 +0.2 -0.5 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 -0.5 +0.2 +0.3 +0.1
nitrogen source Gly-DL-Asp (N) +0.1 -0.3 -0.0 +0.6 -0.2
nitrogen source NAG (N) +0.1 -0.3 -0.2 +0.4 +0.1
r2a-hepes control R2A-HEPES control for volatile experiments +0.1 -0.0 +0.4 +0.3 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 -0.2 +0.3 -0.2 +0.4
nitrogen source Cytosine (N) -0.0 -0.4 -0.4 +1.0 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.4 +0.1 -0.1 +1.0
stress copper (II) chloride 1 mM -0.1 -0.1 +0.1 +0.2 +0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -0.1 +0.1 -0.0 +0.5
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