Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc01990 and SMc01991 are separated by 131 nucleotidesSMc01991 and SMc01992 are separated by 80 nucleotidesSMc01992 and SMc01993 are separated by 62 nucleotidesSMc01993 and SMc02016 are separated by 66 nucleotides SMc01990: SMc01990 - ferredoxin reductase, at 2,715,471 to 2,716,700 SMc01990 SMc01991: SMc01991 - short chain dehydrogenase, at 2,716,832 to 2,717,557 SMc01991 SMc01992: SMc01992 - alcohol dehydrogenase, at 2,717,638 to 2,718,678 SMc01992 SMc01993: SMc01993 - dioxygenase ferredoxin protein, at 2,718,741 to 2,719,070 SMc01993 SMc02016: SMc02016 - ferredoxin reductase, at 2,719,137 to 2,720,399 SMc02016
Group Condition SMc01990 SMc01991 SMc01992 SMc01993 SMc02016
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.3 -1.4 -0.0 -0.6 -0.3
nitrogen source L-Asparagine (N) +0.0 -2.2 -0.0 +0.2 -0.2
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.3 -1.6 +0.1 +0.0 -0.2
r2a control R2A control -0.3 -1.4 -0.0 -0.2 +0.1
carbon source Lactitol (C) -0.7 -0.6 +0.2 -0.2 -0.4
carbon source L-Histidine (C) -0.6 -0.3 -0.1 -0.2 -0.4
carbon source Lactulose (C) -0.4 -0.5 -0.1 -0.3 -0.4
carbon source D-Leucrose (C) -0.1 -1.3 +0.0 -0.1 +0.1
nitrogen source L-Arginine (N) -0.3 -0.4 -0.1 -0.6 -0.2
carbon source Xylobiose (C) -0.4 -0.7 +0.1 -0.2 -0.2
nitrogen source L-Leucine (N) -0.8 -0.6 +0.1 +0.2 -0.3
stress Thallium(I) acetate 0.0025 mg/ml -0.0 -1.1 +0.1 -0.1 -0.0
stress Chlorite 0.1 mM -0.2 -0.9 -0.2 +0.2 +0.0
stress 3-octanone 0.456 mM -0.1 -0.6 +0.2 -0.4 -0.1
lb no stress control LB no stress control +0.2 -0.6 -0.0 -0.5 +0.1
nitrogen source Uridine (N) -0.1 -1.0 +0.2 +0.3 +0.1
carbon source Lactitol (C) -0.7 +0.5 +0.4 -0.4 -0.3
carbon source L-Lysine (C) -0.5 +0.6 -0.0 -0.3 -0.1
stress copper (II) chloride 1 mM -0.0 -0.7 +0.1 +0.5 +0.1
stress Paraquat dichloride 0.2 mg/ml -0.0 +0.8 -0.0 -0.5 -0.1
nitrogen source L-Glutamine (N) -0.5 +0.7 +0.3 +0.1 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +1.2 -0.0 -0.1 -0.3
nitrogen source Gelatin (N) -0.3 +0.8 +0.2 +0.1 -0.1
stress Sisomicin 0.004 mg/ml -0.1 +1.2 +0.0 -0.3 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +1.0 +0.2 -0.2 -0.1
lb LB -0.1 +0.6 -0.1 +0.6 +0.1
carbon source D-Sorbitol (C) +0.5 +0.2 -0.2 +0.5 +0.5
stress perchlorate 10 mM -0.2 +0.5 -0.0 +1.1 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 +1.3 +0.3 -0.1 +0.2
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.1 +1.2 +0.3 +0.2 +0.1
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