Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc01980 and SMc01981 are separated by 200 nucleotidesSMc01981 and SMc01982 are separated by 137 nucleotidesSMc01982 and SMc01983 are separated by 33 nucleotidesSMc01983 and SMc01984 overlap by 4 nucleotides SMc01980: SMc01980 - sugar transport system ATP-binding ABC transporter protein, at 2,704,614 to 2,705,681 SMc01980 SMc01981: SMc01981 - cytochrome C transmembrane protein, at 2,705,882 to 2,706,268 SMc01981 SMc01982: SMc01982 - alternative cytochrome C oxidase polypeptide II transmembrane protein, at 2,706,406 to 2,707,350 SMc01982 SMc01983: SMc01983 - alternative cytochrome C oxidase polypeptide I transmembrane protein, at 2,707,384 to 2,709,165 SMc01983 SMc01984: SMc01984 - cytochrome-C oxidase transmembrane protein, at 2,709,162 to 2,709,860 SMc01984
Group Condition SMc01980 SMc01981 SMc01982 SMc01983 SMc01984
stress Cisplatin 0.001 mg/ml -0.0 -0.8 +0.2 +0.1 -0.9
stress Polymyxin B sulfate 0.00005 mg/ml -0.8 -0.3 +0.0 +0.0 -0.3
stress Aluminum chloride -0.7 -0.6 -0.1 +0.2 -0.1
temperature LB, 23C -0.1 -0.1 -0.0 -0.2 -0.8
stress Chloride 200 mM -0.2 -0.5 -0.0 -0.1 -0.3
pH LB, pH7 -0.2 +0.1 -0.1 -0.1 -0.8
r2a control R2A control for volatile experiments -0.1 -1.0 -0.1 -0.1 +0.4
pH LB, pH6 -0.3 +0.3 +0.0 -0.1 -0.8
lb LB +0.1 -0.2 +0.3 -0.1 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -0.4 +0.2 +0.0 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -0.1 +0.0 +0.1 -1.0
carbon source L-Leucine (C) -0.1 +0.2 -0.1 +0.0 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 -0.7 -0.5 -0.1 +0.7
nitrogen source Gelatin (N) -0.2 -0.7 -0.1 +0.1 +0.4
pH LB, pH6 +0.2 -0.4 +0.2 -0.1 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 -0.3 -0.5 +0.1 +0.2
nitrogen source L-Arginine (N) +0.2 -0.4 -0.4 +0.1 +0.5
nutrient L-Histidine +0.4 -0.4 -0.2 +0.1 +0.2
nitrogen source L-Asparagine (N) +0.3 -1.1 +0.0 +0.0 +0.8
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.3 +0.3 +0.1 -0.1 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -0.6 +0.2 +0.1 +0.4
nitrogen source L-Leucine (N) -0.0 +0.0 -0.5 +0.1 +0.8
nitrogen source D-Glucosamine Hydrochloride (N) +0.4 -0.4 -0.1 +0.2 +0.5
nutrient L-Lysine +0.4 -0.6 -0.1 +0.1 +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +0.3 +0.1 +0.0 -0.3
stress Chlorite 0.1 mM -0.3 -0.2 +0.3 +0.2 +0.7
stress 6-Pentyl-2H-pyran-2-one 0.4557668333 mM +0.3 -0.1 +0.2 -0.3 +0.6
stress 6-Pentyl-2H-pyran-2-one 0.4177863333 mM +0.4 +0.3 -0.1 -0.1 +0.4
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.4 +0.4 +0.2 -0.3 +1.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.1 -0.2 -0.0 +0.9
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