Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc01962 and SMc01963 overlap by 4 nucleotidesSMc01963 and SMc01964 overlap by 4 nucleotidesSMc01964 and SMc01965 overlap by 4 nucleotidesSMc01965 and SMc01966 are separated by 174 nucleotides SMc01962: SMc01962 - hypothetical protein, at 2,684,402 to 2,685,181 SMc01962 SMc01963: SMc01963 - spermidine/putrescine ABC transporter permease, at 2,685,178 to 2,685,978 SMc01963 SMc01964: SMc01964 - spermidine/putrescine ABC transporter permease, at 2,685,975 to 2,686,829 SMc01964 SMc01965: SMc01965 - spermidine/putrescine ABC transporter ATP-binding protein, at 2,686,826 to 2,687,863 SMc01965 SMc01966: SMc01966 - spermidine/putrescine ABC transporter periplasmic protein, at 2,688,038 to 2,689,117 SMc01966
Group Condition SMc01962 SMc01963 SMc01964 SMc01965 SMc01966
stress Nickel (II) chloride 1 mM -0.3 -0.1 -0.1 -0.9 -0.2
nitrogen source L-Histidine (N) -0.2 -0.2 +0.0 -1.0 -0.0
carbon source L-Arabinose (C) +0.1 -0.1 -0.2 -0.7 -0.3
carbon source Xylobiose (C) -0.4 -0.0 +0.0 -0.8 +0.0
lb LB -0.4 -0.2 -0.1 -0.4 +0.0
stress Aluminum chloride -0.5 -0.3 -0.1 +0.1 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 -0.2 -0.3 -0.8 -0.2
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) -0.1 +0.1 -0.2 -0.5 -0.3
stress nitrite 20 mM -0.3 -0.1 +0.1 -0.8 +0.1
r2a control R2A control for volatile experiments -0.2 +0.2 -0.4 -0.6 -0.0
pH LB, pH8 -0.7 +0.1 +0.1 -0.3 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.0 -0.6 -0.2 +0.3
nitrogen source L-Glutamine (N) -0.1 -0.2 +0.0 -0.7 +0.2
carbon source D-Mannose (C) +0.3 -0.1 -0.2 -0.4 -0.4
stress Paraquat dichloride 0.3 mg/ml +0.0 -0.6 +0.1 -0.4 +0.2
stress Thallium(I) acetate 0.0025 mg/ml -0.0 +0.1 +0.1 -0.8 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -0.1 -0.4 +0.7 -0.2
stress Cisplatin 0.001 mg/ml -0.1 -0.1 +0.8 -0.8 -0.2
stress Sisomicin 0.004 mg/ml -0.2 -0.0 +0.5 -0.8 +0.3
nitrogen source L-Leucine (N) +0.5 -0.1 +0.1 -1.1 +0.5
stress Cisplatin 0.0005 mg/ml +0.4 -0.1 -0.2 -0.5 +0.2
r2a control R2A control for volatile experiments -0.4 +0.2 +0.1 +0.2 -0.3
nutrient L-Histidine +0.1 -0.5 -0.1 +0.5 -0.1
nitrogen source L-Arginine (N) -0.1 +0.1 -0.0 +0.6 -0.6
nutrient Min media with glucose -0.0 -0.3 +0.3 +0.5 -0.2
nutrient L-Lysine -0.1 -0.2 -0.2 +0.9 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.1 -0.2 +0.3 +0.2
stress Polymyxin B sulfate 0.00005 mg/ml -0.7 +0.1 +0.1 +1.0 +0.4
carbon source succinate (C) +0.5 -0.1 +0.1 +0.6 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 -0.1 -0.0 +0.7 +0.1
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