Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc04453 and SMc01885 are separated by 1270 nucleotidesSMc01885 and SMc01884 are separated by 187 nucleotidesSMc01884 and SMc01883 are separated by 116 nucleotidesSMc01883 and SMc01882 are separated by 3 nucleotides SMc04453: SMc04453 - hypothetical protein, at 2,320,134 to 2,320,295 SMc04453 SMc01885: SMc01885 - aminopeptidase P protein, at 2,321,566 to 2,323,401 SMc01885 SMc01884: SMc01884 - signal peptide protein, at 2,323,589 to 2,323,828 SMc01884 SMc01883: SMc01883 - hypothetical protein, at 2,323,945 to 2,324,253 SMc01883 SMc01882: SMc01882 - hypothetical protein, at 2,324,257 to 2,324,973 SMc01882
Group Condition SMc04453 SMc01885 SMc01884 SMc01883 SMc01882
stress Nickel (II) chloride 1 mM -0.9 -3.3 N.D. -0.4 -0.7
r2a control R2A control for volatile experiments -2.8 -0.3 N.D. +0.2 -0.4
dmso control DMSO control -2.9 -0.1 N.D. +0.1 +0.1
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) -2.1 -0.1 N.D. -0.3 -0.0
stress Sisomicin 0.004 mg/ml -0.9 -1.5 N.D. +0.1 -0.0
stress 1-octen-3-ol 0.4933903333 mM -1.3 -0.2 N.D. -0.3 -0.0
carbon source methyl-beta-D-xylopyranoside (C) -1.4 -0.3 N.D. -0.1 +0.1
stress 1-octen-3-ol 0.5427293333 mM -1.3 -0.2 N.D. -0.2 +0.1
stress 3-octanone 0.456 mM -1.4 +0.0 N.D. -0.2 +0.1
carbon source L-Fucose (C) +0.3 -0.2 N.D. -0.8 -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -0.3 N.D. +0.2 -0.3
nitrogen source Gly-DL-Asp (N) -1.1 +0.3 N.D. -0.5 +0.1
lb LB -0.6 -1.0 N.D. +0.5 -0.1
stress 1-octen-3-ol 0.4933903333 mM -1.4 +0.1 N.D. -0.0 +0.2
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -1.3 +0.1 N.D. +0.7 -0.5
nitrogen source L-Histidine (N) -1.5 +0.6 N.D. +0.1 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 +0.7 N.D. -0.7 +0.4
nitrogen source Gelatin (N) +0.6 -0.9 N.D. -0.3 +0.1
carbon source acetate (C) +0.7 -0.9 N.D. -0.1 +0.2
stress perchlorate 10 mM -1.3 +1.6 N.D. -0.5 +0.5
nitrogen source Cytosine (N) +1.0 -0.5 N.D. +0.1 +0.2
nutrient Min media with glucose +1.1 +0.5 N.D. -0.3 -0.4
lb LB -0.5 +1.1 N.D. +0.1 +0.2
carbon source pipercolic (C) +1.0 -0.5 N.D. +0.4 +0.2
carbon source D-Leucrose (C) +1.1 +0.2 N.D. -0.5 +0.2
stress D-Cycloserine 0.05 mg/ml -0.7 +1.5 N.D. +0.3 +0.1
lb LB -0.5 +1.5 N.D. -0.0 +0.4
lb LB -0.1 +1.6 N.D. +0.2 -0.1
stress Paraquat dichloride 0.2 mg/ml +0.7 +0.6 N.D. +0.2 +0.2
nutrient L-Lysine +1.3 +0.5 N.D. -0.1 +0.2
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