Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc01855 and SMc01854 are separated by 198 nucleotidesSMc01854 and SMc01853 overlap by 4 nucleotidesSMc01853 and SMc01852 are separated by 342 nucleotidesSMc01852 and SMc01851 are separated by 137 nucleotides SMc01855: SMc01855 - hypothetical protein, at 2,358,575 to 2,359,114 SMc01855 SMc01854: SMc01854 - amidase (AMPD protein), at 2,359,313 to 2,360,104 SMc01854 SMc01853: SMc01853 - hypothetical protein, at 2,360,101 to 2,360,808 SMc01853 SMc01852: SMc01852 - pyrophosphate--fructose-6-phosphate 1-phosphotransferase, at 2,361,151 to 2,362,365 SMc01852 SMc01851: SMc01851 - amino acid efflux protein, at 2,362,503 to 2,363,138 SMc01851
Group Condition SMc01855 SMc01854 SMc01853 SMc01852 SMc01851
stress Sisomicin 0.004 mg/ml +0.2 N.D. -2.2 -2.9 -0.0
carbon source Glycerol (C) -0.1 N.D. -0.2 -3.7 +0.0
carbon source L-Rhamnose (C) +0.1 N.D. -0.6 -3.0 -0.0
carbon source acetate (C) +0.1 N.D. -0.6 -2.6 +0.0
carbon source m-Inositol (C) -0.0 N.D. -0.1 -2.9 +0.2
carbon source acetate (C) +0.1 N.D. -0.9 -2.2 +0.2
carbon source D-Galactose (C) +0.1 N.D. -0.2 -2.6 -0.1
carbon source D,L-Lactate (C) +0.0 N.D. -0.2 -2.5 +0.1
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) +0.3 N.D. -0.1 -2.8 +0.0
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) -0.0 N.D. -0.1 -2.6 +0.2
carbon source D-Mannitol (C) +0.1 N.D. -0.7 -2.0 +0.2
carbon source L-Arabinose (C) +0.1 N.D. -0.3 -2.3 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 N.D. -0.7 -2.2 +0.2
carbon source D-Mannitol (C) -0.0 N.D. -0.3 -2.2 +0.2
nitrogen source NAG (N) +0.3 N.D. -0.2 -1.9 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 N.D. -0.9 +1.1 -0.2
nitrogen source Gelatin (N) +0.1 N.D. -0.2 +1.0 -1.3
stress Thallium(I) acetate 0.001 mg/ml +0.1 N.D. -1.3 +1.1 +0.3
stress Polymyxin B sulfate 0.00005 mg/ml +0.6 N.D. -2.3 +1.7 +0.2
stress Paraquat dichloride 0.2 mg/ml -0.1 N.D. -0.9 +1.4 +0.2
lb LB +0.3 N.D. -1.0 +1.7 -0.4
stress Paraquat dichloride 0.2 mg/ml +0.1 N.D. -0.9 +1.7 -0.2
lb LB +0.4 N.D. -0.9 +1.8 -0.3
lb LB +0.2 N.D. -0.5 +1.8 -0.2
stress D-Cycloserine 0.05 mg/ml +0.4 N.D. -0.9 +2.4 -0.5
stress perchlorate 10 mM +0.3 N.D. -0.5 +2.0 -0.1
tsb Day4 TSB -0.1 N.D. +0.2 +2.5 -0.1
tsb Day2 TSB +0.1 N.D. +0.2 +2.7 +0.0
tsb Day1 TSB +0.1 N.D. +0.3 +2.6 -0.1
tsb Day3 TSB +0.0 N.D. +0.3 +2.7 +0.0
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