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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc01822 and SMc01823 are separated by 151 nucleotides
SMc01823 and SMc01824 overlap by 11 nucleotides
SMc01824 and SMc01825 are separated by 2 nucleotides
SMc01825 and SMc01826 overlap by 4 nucleotides
SMc01822: SMc01822 - hypothetical protein, at 2,646,604 to 2,646,987
SMc01822
SMc01823: SMc01823 - ABC transporter ATP-binding protein, at 2,647,139 to 2,647,930
SMc01823
SMc01824: SMc01824 - hypothetical protein, at 2,647,920 to 2,648,405
SMc01824
SMc01825: SMc01825 - ABC transporter permease, at 2,648,408 to 2,649,292
SMc01825
SMc01826: SMc01826 - ABC transporter permease, at 2,649,289 to 2,650,158
SMc01826
Group
Condition
SMc01822
SMc01823
SMc01824
SMc01825
SMc01826
nitrogen source
L-Asparagine (N)
-0.2
+0.2
-0.7
-0.3
-1.3
nitrogen source
L-Histidine (N)
-0.2
-0.3
+0.2
-0.7
-0.7
nitrogen source
nitrate (N)
+0.1
+0.1
-0.2
-0.3
-1.2
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.4
+0.2
-0.6
-0.5
-0.2
carbon source
Sucrose (C)
-0.0
-0.3
-0.2
-0.2
-0.7
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+0.1
+0.0
-0.2
-1.1
carbon source
D-Cellobiose (C)
-0.0
-0.3
-0.3
+0.0
-0.7
carbon source
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
-0.1
+0.0
-0.1
-0.1
-1.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
-0.2
-0.0
+0.1
-0.7
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
+0.0
-0.1
+0.2
-0.2
-1.1
carbon source
L-Alanine (C)
+0.1
-0.5
-0.2
-0.0
-0.5
stress
nitrate 40 mM
-0.0
-0.5
-0.4
-0.3
+0.3
stress
1-octen-3-ol 0.5427293333 mM
+0.0
+0.1
+0.1
-0.0
-1.2
stress
1-octen-3-ol 0.5427293333 mM
-0.2
+0.1
+0.1
+0.0
-0.9
lb
LB
-0.5
-0.1
-0.0
-0.4
+0.2
nitrogen source
Uridine (N)
-0.0
+0.4
-0.3
-0.7
-0.1
stress
copper (II) chloride 1 mM
+0.1
+0.4
-0.7
-0.1
-0.3
nitrogen source
L-Arginine (N)
-0.2
-0.2
-0.1
-0.3
+0.5
stress
Sisomicin 0.004 mg/ml
-0.2
-0.3
-0.5
+0.1
+0.5
stress
Paraquat dichloride 0.3 mg/ml
-0.3
-0.4
+0.1
-0.1
+0.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
-0.1
+0.8
-0.4
-0.6
stress
Cisplatin 0.0005 mg/ml
+0.2
-0.4
-0.3
+0.3
+0.2
nutrient
Min media with glucose
-0.2
+0.2
-0.2
-0.2
+0.7
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.1
+0.3
-0.4
-0.3
+1.0
stress
Thallium(I) acetate 0.0025 mg/ml
-0.0
+0.3
-0.2
-0.2
+0.7
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
+0.3
-0.1
-0.4
+0.7
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
+0.1
+0.8
-0.0
+0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+0.2
-0.0
+0.7
-0.1
+0.3
r2a control
R2A control for volatile experiments
+0.1
+0.1
-0.1
+0.4
+0.8
carbon source
D-Mannitol (C)
+0.2
-0.1
+0.4
-0.1
+0.8
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