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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc04433 and SMc01811 overlap by 229 nucleotides
SMc01811 and SMc01812 are separated by 134 nucleotides
SMc01812 and SMc01813 are separated by 171 nucleotides
SMc01813 and SMc04448 are separated by 108 nucleotides
SMc04433: SMc04433 - hypothetical protein, at 1,356,574 to 1,356,903
SMc04433
SMc01811: SMc01811 - hypothetical protein, at 1,356,675 to 1,357,718
SMc01811
SMc01812: SMc01812 - cytochrome P450-like monooxygenase, at 1,357,853 to 1,359,100
SMc01812
SMc01813: SMc01813 - hypothetical protein, at 1,359,272 to 1,360,129
SMc01813
SMc04448: SMc04448 - hypothetical protein, at 1,360,238 to 1,361,803
SMc04448
Group
Condition
SMc04433
SMc01811
SMc01812
SMc01813
SMc04448
nitrogen source
L-Arginine (N)
N.D.
N.D.
+0.0
-1.7
+0.4
nitrogen source
Uridine (N)
N.D.
N.D.
+0.0
-0.8
+0.1
pH
LB, pH6
N.D.
N.D.
+0.4
-1.1
+0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
-0.0
-1.1
+0.4
stress
Nickel (II) chloride 1 mM
N.D.
N.D.
-0.4
-0.4
+0.1
pH
LB, pH6
N.D.
N.D.
-0.2
-0.6
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
+0.3
-0.9
+0.1
stress
Cisplatin 0.0005 mg/ml
N.D.
N.D.
-0.3
-0.4
+0.3
stress
Chloride 200 mM
N.D.
N.D.
+0.4
-0.8
+0.0
stress
copper (II) chloride 1 mM
N.D.
N.D.
+0.1
-0.6
+0.2
stress
Fusidic 0.0001 mg/ml
N.D.
N.D.
+0.3
-0.8
+0.2
stress
Paraquat dichloride 0.05 mg/ml
N.D.
N.D.
+0.1
-0.6
+0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
+0.4
-0.6
+0.0
carbon source
Lactulose (C)
N.D.
N.D.
+0.4
-0.6
+0.2
temperature
LB, 30C
N.D.
N.D.
+0.3
-0.5
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
-0.1
-0.3
+0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
-0.0
-0.6
+0.6
lb
LB
N.D.
N.D.
-0.0
-0.5
+0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
+0.2
-0.6
+0.5
stress
Paraquat dichloride 0.2 mg/ml
N.D.
N.D.
+0.2
-0.5
+0.4
nitrogen source
nitrate (N)
N.D.
N.D.
+0.3
-0.3
+0.2
stress
Paraquat dichloride 0.2 mg/ml
N.D.
N.D.
+0.1
-0.4
+0.5
lb
LB
N.D.
N.D.
+0.2
-0.3
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
+0.5
-0.5
+0.3
nitrogen source
Gelatin (N)
N.D.
N.D.
+0.3
-0.3
+0.3
nitrogen source
NAG (N)
N.D.
N.D.
+0.3
-0.2
+0.2
lb
LB
N.D.
N.D.
+0.3
-0.3
+0.4
stress
Polymyxin B sulfate 0.00005 mg/ml
N.D.
N.D.
+0.6
-0.2
+0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
+0.6
-0.2
+0.2
stress
perchlorate 10 mM
N.D.
N.D.
+0.2
+0.1
+0.6
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