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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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500 nt
SMc01804 and SMc01805 are separated by 218 nucleotides
SMc01805 and SMc01806 are separated by 168 nucleotides
SMc01806 and SMc01807 are separated by 88 nucleotides
SMc01807 and SMc01808 are separated by 191 nucleotides
SMc01804: SMc01804 - 50S ribosomal protein L13, at 1,350,749 to 1,351,213
SMc01804
SMc01805: SMc01805 - hypothetical protein, at 1,351,432 to 1,351,863
SMc01805
SMc01806: SMc01806 - enoyl-CoA hydratase, at 1,352,032 to 1,352,853
SMc01806
SMc01807: SMc01807 - hypothetical protein, at 1,352,942 to 1,353,778
SMc01807
SMc01808: SMc01808 - hypothetical protein, at 1,353,970 to 1,354,398
SMc01808
Group
Condition
SMc01804
SMc01805
SMc01806
SMc01807
SMc01808
nitrogen source
Gelatin (N)
N.D.
-0.4
-0.6
+0.1
-0.4
stress
Chlorite 0.1 mM
N.D.
+0.2
-0.7
-0.1
-0.6
stress
Cisplatin 0.0005 mg/ml
N.D.
-0.5
+0.3
-0.2
-0.6
nitrogen source
Cytosine (N)
N.D.
-0.0
-0.3
-0.0
-0.7
nitrogen source
L-Glutamine (N)
N.D.
-0.3
-0.4
+0.0
-0.3
nitrogen source
L-Leucine (N)
N.D.
-0.4
-0.5
+0.1
-0.1
stress
nitrate 40 mM
N.D.
-0.7
+0.4
-0.1
-0.2
stress
Nickel (II) chloride 1 mM
N.D.
-0.0
-0.4
+0.2
-0.4
pH
LB, pH8
N.D.
-0.1
+0.3
-0.1
-0.6
nitrogen source
D-Glucosamine Hydrochloride (N)
N.D.
+0.2
-0.5
+0.0
-0.3
carbon source
Lactitol (C)
N.D.
-1.0
+0.4
-0.1
+0.1
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
N.D.
+0.1
-0.4
+0.1
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.0
+0.4
-0.1
-0.7
stress
3-octanone 0.456 mM
N.D.
+0.3
-0.3
+0.1
-0.6
stress
Paraquat dichloride 0.2 mg/ml
N.D.
-0.0
+0.4
-0.1
-0.8
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
N.D.
-0.2
+0.2
+0.1
-0.6
pH
LB, pH6
N.D.
-0.2
+0.4
-0.2
-0.4
carbon source
Lactitol (C)
N.D.
-0.6
+0.2
+0.3
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
-0.6
+0.5
-0.3
+0.2
stress
1-octen-3-ol 0.5427293333 mM
N.D.
+0.3
-0.3
+0.2
-0.3
pH
LB, pH6
N.D.
-0.5
+0.5
+0.2
-0.2
nitrogen source
L-Arginine (N)
N.D.
-0.0
+0.4
-0.6
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
-0.8
+0.5
-0.2
+0.7
stress
1-octen-3-ol 0.4933903333 mM
N.D.
+0.3
+0.3
-0.0
-0.4
stress
Sisomicin 0.004 mg/ml
N.D.
+0.4
+0.3
-0.2
-0.2
stress
Aluminum chloride
N.D.
-0.1
-0.3
+0.2
+0.5
stress
Paraquat dichloride 0.3 mg/ml
N.D.
+0.4
+0.6
+0.2
-0.3
stress
perchlorate 10 mM
N.D.
+0.2
+0.5
-0.1
+0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
+0.0
+0.5
+0.4
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
+0.3
+0.8
+0.1
+0.1
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