Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc01638 and SMc01639 are separated by 251 nucleotidesSMc01639 and SMc01640 are separated by 194 nucleotidesSMc01640 and SMc01641 overlap by 4 nucleotidesSMc01641 and SMc01642 are separated by 340 nucleotides SMc01638: SMc01638 - bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase, at 2,430,531 to 2,432,021 SMc01638 SMc01639: SMc01639 - acyl-CoA dehydrogenase, at 2,432,273 to 2,433,433 SMc01639 SMc01640: SMc01640 - acyl-COA synthetase, at 2,433,628 to 2,435,691 SMc01640 SMc01641: SMc01641 - carnitinyl-CoA dehydratase, at 2,435,688 to 2,436,479 SMc01641 SMc01642: SMc01642 - periplasmic binding protein, at 2,436,820 to 2,438,409 SMc01642
Group Condition SMc01638 SMc01639 SMc01640 SMc01641 SMc01642
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 -0.1 -0.4 -0.9 -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.2 -0.1 -1.0 -1.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +0.0 -0.1 -0.9 -0.7
stress Cisplatin 0.0005 mg/ml -0.2 -0.1 -0.0 -1.2 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +0.0 -0.0 -1.2 -0.2
stress sodium fluoride 100 mM +0.1 +0.0 -0.1 -0.4 -0.7
stress nitrate 40 mM -0.3 -0.4 +0.3 -0.8 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.2 -0.3 -0.4 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 -0.5 -0.0 -0.4 +0.2
stress Aluminum chloride -0.2 +0.2 -0.3 -0.6 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.3 -0.2 -0.2 -0.5
nutrient L-Histidine -0.3 -0.2 -0.2 -0.1 +0.3
nitrogen source L-Arginine (N) +0.0 -0.0 +0.5 -0.8 -0.2
stress Chlorite 0.1 mM +0.1 +0.1 +0.2 -0.7 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 -0.1 +0.1 +0.4 -0.8
stress Polymyxin B sulfate 0.00005 mg/ml -0.7 -0.0 +0.1 +0.1 +0.4
stress copper (II) chloride 1 mM +0.4 -0.4 +0.2 -0.5 +0.4
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.3 +0.4 +0.1 -0.3 +0.1
pH LB, pH8 -0.3 -0.1 -0.1 +0.4 +0.3
r2a control R2A control for volatile experiments +0.3 +0.2 +0.4 -0.4 -0.1
r2a control R2A control for volatile experiments +0.3 -0.2 -0.1 +0.6 -0.0
nitrogen source L-Histidine (N) -0.2 +0.3 +0.0 +0.4 +0.3
nitrogen source Gly-DL-Asp (N) -0.1 +0.2 +0.1 +0.5 +0.2
r2a control R2A control for volatile experiments +0.1 +0.3 +0.5 -0.2 +0.2
stress Thallium(I) acetate 0.0025 mg/ml +0.1 -0.1 +0.2 +0.3 +0.4
nitrogen source L-Asparagine (N) -0.0 +0.1 +0.3 +0.5 +0.3
stress Cisplatin 0.001 mg/ml +0.3 +0.0 +0.3 +0.5 +0.5
nitrogen source nitrate (N) +0.0 +0.2 +0.4 +0.8 +0.4
nitrogen source Gelatin (N) +0.1 +0.2 +0.5 +1.3 +0.7
nitrogen source Cytosine (N) +0.7 +0.4 +0.4 +1.3 +1.0
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