Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 243 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
SMc01638 and SMc01639 are separated by 251 nucleotides
SMc01639 and SMc01640 are separated by 194 nucleotides
SMc01640 and SMc01641 overlap by 4 nucleotides
SMc01641 and SMc01642 are separated by 340 nucleotides
SMc01638: SMc01638 - bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase, at 2,430,531 to 2,432,021
SMc01638
SMc01639: SMc01639 - acyl-CoA dehydrogenase, at 2,432,273 to 2,433,433
SMc01639
SMc01640: SMc01640 - acyl-COA synthetase, at 2,433,628 to 2,435,691
SMc01640
SMc01641: SMc01641 - carnitinyl-CoA dehydratase, at 2,435,688 to 2,436,479
SMc01641
SMc01642: SMc01642 - periplasmic binding protein, at 2,436,820 to 2,438,409
SMc01642
Group
Condition
SMc01638
SMc01639
SMc01640
SMc01641
SMc01642
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
-0.1
-0.4
-0.9
-1.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
+0.2
-0.1
-1.0
-1.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
+0.0
-0.1
-0.9
-0.7
stress
Cisplatin 0.0005 mg/ml
-0.2
-0.1
-0.0
-1.2
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
+0.0
-0.0
-1.2
-0.2
stress
sodium fluoride 100 mM
+0.1
+0.0
-0.1
-0.4
-0.7
stress
nitrate 40 mM
-0.3
-0.4
+0.3
-0.8
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
+0.2
-0.3
-0.4
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
-0.5
-0.0
-0.4
+0.2
stress
Aluminum chloride
-0.2
+0.2
-0.3
-0.6
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
+0.3
-0.2
-0.2
-0.5
nutrient
L-Histidine
-0.3
-0.2
-0.2
-0.1
+0.3
nitrogen source
L-Arginine (N)
+0.0
-0.0
+0.5
-0.8
-0.2
stress
Chlorite 0.1 mM
+0.1
+0.1
+0.2
-0.7
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.0
-0.1
+0.1
+0.4
-0.8
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.7
-0.0
+0.1
+0.1
+0.4
stress
copper (II) chloride 1 mM
+0.4
-0.4
+0.2
-0.5
+0.4
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.3
+0.4
+0.1
-0.3
+0.1
pH
LB, pH8
-0.3
-0.1
-0.1
+0.4
+0.3
r2a control
R2A control for volatile experiments
+0.3
+0.2
+0.4
-0.4
-0.1
r2a control
R2A control for volatile experiments
+0.3
-0.2
-0.1
+0.6
-0.0
nitrogen source
L-Histidine (N)
-0.2
+0.3
+0.0
+0.4
+0.3
nitrogen source
Gly-DL-Asp (N)
-0.1
+0.2
+0.1
+0.5
+0.2
r2a control
R2A control for volatile experiments
+0.1
+0.3
+0.5
-0.2
+0.2
stress
Thallium(I) acetate 0.0025 mg/ml
+0.1
-0.1
+0.2
+0.3
+0.4
nitrogen source
L-Asparagine (N)
-0.0
+0.1
+0.3
+0.5
+0.3
stress
Cisplatin 0.001 mg/ml
+0.3
+0.0
+0.3
+0.5
+0.5
nitrogen source
nitrate (N)
+0.0
+0.2
+0.4
+0.8
+0.4
nitrogen source
Gelatin (N)
+0.1
+0.2
+0.5
+1.3
+0.7
nitrogen source
Cytosine (N)
+0.7
+0.4
+0.4
+1.3
+1.0
remove
SMc01638
plot
remove
SMc01639
plot
remove
SMc01640
remove
SMc01641
plot
remove
SMc01642
plot