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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc01632 and SMc01633 are separated by 152 nucleotides
SMc01633 and SMc01634 overlap by 1 nucleotides
SMc01634 and SMc01635 are separated by 4 nucleotides
SMc01635 and SMc01636 are separated by 91 nucleotides
SMc01632: SMc01632 - periplasmic binding ABC transporter protein, at 2,424,518 to 2,425,681
SMc01632
SMc01633: SMc01633 - ABC transporter permease, at 2,425,834 to 2,426,700
SMc01633
SMc01634: SMc01634 - ABC transporter permease, at 2,426,700 to 2,427,518
SMc01634
SMc01635: SMc01635 - oxidoreductase, at 2,427,523 to 2,428,284
SMc01635
SMc01636: SMc01636 - transcriptional regulator, at 2,428,376 to 2,429,347
SMc01636
Group
Condition
SMc01632
SMc01633
SMc01634
SMc01635
SMc01636
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
+0.1
-0.4
-0.3
-1.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.2
-0.0
-0.3
-1.7
+0.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
-0.2
-0.8
-0.2
-0.2
nitrogen source
NAG (N)
-0.4
-0.2
-0.4
-0.1
-0.1
stress
copper (II) chloride 1 mM
-0.2
+0.1
-0.1
+0.1
-1.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
-0.1
-0.7
+0.2
-0.5
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.4
-0.2
-0.5
+0.1
+0.1
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.2
-0.1
-0.4
+0.4
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
-0.0
-0.9
+0.3
-0.2
stress
Thallium(I) acetate 0.0025 mg/ml
+0.0
-0.2
-0.6
+0.4
-0.0
carbon source
D-Glucose (C)
-0.3
-0.1
+0.3
+0.2
-0.5
dmso control
DMSO control
-0.1
+0.2
+0.3
-0.7
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
+0.0
-0.8
+0.6
-0.0
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.0
+0.1
-0.3
-0.4
+0.4
stress
Cisplatin 0.001 mg/ml
+0.0
+0.2
+0.3
-1.0
+0.5
stress
3-octanone 0.456 mM
+0.3
-0.0
+0.5
-0.7
-0.0
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.1
+0.0
-0.2
-0.3
+0.5
nitrogen source
Uridine (N)
-0.0
-0.3
+0.3
+0.3
-0.3
r2a control
R2A control for volatile experiments
+0.2
-0.2
-0.3
+0.0
+0.5
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.2
+0.2
-0.2
-0.3
+0.4
stress
1-octen-3-ol 0.6030326667 mM
+0.2
+0.2
-0.0
-0.5
+0.5
r2a control
R2A control for volatile experiments
-0.0
+0.2
-0.5
+0.2
+0.6
nitrogen source
L-Leucine (N)
+0.2
+0.1
+0.7
-0.4
-0.0
nitrogen source
Cytosine (N)
+0.2
-0.0
-0.2
+0.2
+0.7
lb no stress control
LB no stress control
+0.1
+0.2
-0.2
+0.4
+0.3
carbon source
Lactitol (C)
+0.1
-0.1
+0.5
+0.6
+0.2
stress
Chlorite 0.1 mM
+0.3
+0.0
+1.3
+0.2
-0.3
stress
3-octanone 5.310333333 mM
+0.3
+0.1
+0.0
+0.7
+0.4
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.3
+0.3
+1.0
-0.2
+0.4
stress
Aluminum chloride
+0.4
+0.0
+1.2
+0.1
+0.3
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