Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc01628 and SMc01629 are separated by 114 nucleotidesSMc01629 and SMc01630 are separated by 206 nucleotidesSMc01630 and SMc01631 are separated by 184 nucleotidesSMc01631 and SMc01632 are separated by 51 nucleotides SMc01628: SMc01628 - periplasmic binding ABC transporter protein, at 2,419,673 to 2,421,118 SMc01628 SMc01629: SMc01629 - ERY operon repressor transcription regulator protein, at 2,421,233 to 2,422,192 SMc01629 SMc01630: SMc01630 - transcriptional regulator, at 2,422,399 to 2,423,202 SMc01630 SMc01631: SMc01631 - ABC transporter ATP-binding protein, at 2,423,387 to 2,424,466 SMc01631 SMc01632: SMc01632 - periplasmic binding ABC transporter protein, at 2,424,518 to 2,425,681 SMc01632
Group Condition SMc01628 SMc01629 SMc01630 SMc01631 SMc01632
carbon source L-Lysine (C) -0.2 -0.2 -0.2 -0.1 -0.1
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.1 -0.0 +0.2 -0.2 -0.4
r2a control R2A control for volatile experiments -0.3 -0.5 +0.1 +0.1 -0.0
r2a-hepes control R2A-HEPES control for volatile experiments -0.0 -0.4 -0.1 -0.2 +0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.1 -0.3 -0.3 -0.1 +0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.0 -0.5 -0.1 +0.1 +0.1
r2a-hepes control R2A-HEPES control for volatile experiments +0.1 -0.5 -0.0 -0.1 +0.2
lb no stress control LB no stress control -0.0 -0.4 -0.2 +0.2 +0.1
stress 3-octanone 0.456 mM -0.0 -0.6 -0.2 +0.4 +0.3
r2a-hepes control R2A-HEPES control for volatile experiments +0.0 -0.4 +0.1 +0.2 +0.1
carbon source D-Glucosamine Hydrochloride (C) +0.1 +0.1 -0.3 +0.2 -0.2
stress 3-octanone 5.310333333 mM -0.1 -0.3 +0.2 -0.1 +0.3
stress copper (II) chloride 1 mM +0.1 +0.5 -0.4 +0.1 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.1 +0.1 +0.5 +0.0 -0.2
stress Paraquat dichloride 0.3 mg/ml -0.1 +0.4 -0.2 -0.0 +0.2
stress Cisplatin 0.0005 mg/ml -0.2 +0.5 +0.0 -0.2 +0.1
stress perchlorate 10 mM -0.1 +0.4 +0.4 -0.3 -0.0
nitrogen source NAG (N) -0.1 +0.3 +0.1 +0.3 -0.4
stress nitrate 40 mM +0.2 +0.5 +0.1 -0.3 -0.0
stress Polymyxin B sulfate 0.00005 mg/ml +0.2 +0.2 -0.1 -0.1 +0.3
pH LB, pH7 -0.1 +0.3 +0.2 +0.1 -0.0
stress Paraquat dichloride 0.2 mg/ml +0.1 +0.5 -0.1 +0.1 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +0.3 -0.0 +0.2 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 +0.2 +0.2 +0.3 -0.1
stress Aluminum chloride +0.2 +0.1 +0.2 -0.1 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.0 +0.2 +0.3 +0.0
nitrogen source L-Arginine (N) -0.1 -0.1 +0.2 +0.8 -0.1
stress Chlorite 0.1 mM +0.2 +0.3 -0.0 +0.3 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.5 -0.2 +0.2 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.4 +0.4 +0.4 +0.2
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