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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc01628 and SMc01629 are separated by 114 nucleotides
SMc01629 and SMc01630 are separated by 206 nucleotides
SMc01630 and SMc01631 are separated by 184 nucleotides
SMc01631 and SMc01632 are separated by 51 nucleotides
SMc01628: SMc01628 - periplasmic binding ABC transporter protein, at 2,419,673 to 2,421,118
SMc01628
SMc01629: SMc01629 - ERY operon repressor transcription regulator protein, at 2,421,233 to 2,422,192
SMc01629
SMc01630: SMc01630 - transcriptional regulator, at 2,422,399 to 2,423,202
SMc01630
SMc01631: SMc01631 - ABC transporter ATP-binding protein, at 2,423,387 to 2,424,466
SMc01631
SMc01632: SMc01632 - periplasmic binding ABC transporter protein, at 2,424,518 to 2,425,681
SMc01632
Group
Condition
SMc01628
SMc01629
SMc01630
SMc01631
SMc01632
carbon source
L-Lysine (C)
-0.2
-0.2
-0.2
-0.1
-0.1
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.1
-0.0
+0.2
-0.2
-0.4
r2a control
R2A control for volatile experiments
-0.3
-0.5
+0.1
+0.1
-0.0
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.0
-0.4
-0.1
-0.2
+0.1
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.1
-0.3
-0.3
-0.1
+0.1
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.0
-0.5
-0.1
+0.1
+0.1
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.1
-0.5
-0.0
-0.1
+0.2
lb no stress control
LB no stress control
-0.0
-0.4
-0.2
+0.2
+0.1
stress
3-octanone 0.456 mM
-0.0
-0.6
-0.2
+0.4
+0.3
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.0
-0.4
+0.1
+0.2
+0.1
carbon source
D-Glucosamine Hydrochloride (C)
+0.1
+0.1
-0.3
+0.2
-0.2
stress
3-octanone 5.310333333 mM
-0.1
-0.3
+0.2
-0.1
+0.3
stress
copper (II) chloride 1 mM
+0.1
+0.5
-0.4
+0.1
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.1
+0.1
+0.5
+0.0
-0.2
stress
Paraquat dichloride 0.3 mg/ml
-0.1
+0.4
-0.2
-0.0
+0.2
stress
Cisplatin 0.0005 mg/ml
-0.2
+0.5
+0.0
-0.2
+0.1
stress
perchlorate 10 mM
-0.1
+0.4
+0.4
-0.3
-0.0
nitrogen source
NAG (N)
-0.1
+0.3
+0.1
+0.3
-0.4
stress
nitrate 40 mM
+0.2
+0.5
+0.1
-0.3
-0.0
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.2
+0.2
-0.1
-0.1
+0.3
pH
LB, pH7
-0.1
+0.3
+0.2
+0.1
-0.0
stress
Paraquat dichloride 0.2 mg/ml
+0.1
+0.5
-0.1
+0.1
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
+0.3
-0.0
+0.2
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
+0.2
+0.2
+0.3
-0.1
stress
Aluminum chloride
+0.2
+0.1
+0.2
-0.1
+0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
+0.0
+0.2
+0.3
+0.0
nitrogen source
L-Arginine (N)
-0.1
-0.1
+0.2
+0.8
-0.1
stress
Chlorite 0.1 mM
+0.2
+0.3
-0.0
+0.3
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.4
+0.5
-0.2
+0.2
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
+0.4
+0.4
+0.4
+0.2
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