Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc01617 and SMc01618 overlap by 4 nucleotidesSMc01618 and SMc01619 overlap by 4 nucleotidesSMc01619 and SMc01620 are separated by 13 nucleotidesSMc01620 and SMc01621 are separated by 28 nucleotides SMc01617: SMc01617 - hypothetical protein, at 2,407,430 to 2,408,275 SMc01617 SMc01618: SMc01618 - carbohydrate kinase, at 2,408,272 to 2,409,555 SMc01618 SMc01619: SMc01619 - hypothetical protein, at 2,409,552 to 2,410,607 SMc01619 SMc01620: SMc01620 - glycerol-3-phosphate dehydrogenase, at 2,410,621 to 2,412,135 SMc01620 SMc01621: SMc01621 - L-fuculose phosphate aldolase, at 2,412,164 to 2,412,832 SMc01621
Group Condition SMc01617 SMc01618 SMc01619 SMc01620 SMc01621
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.1 -1.9 -0.0 +0.0
carbon source D-Sorbitol (C) -0.0 +0.0 -0.3 -0.2 -1.5
nitrogen source Gelatin (N) -0.1 +0.0 -0.9 -0.2 -0.5
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.0 -0.0 -1.4 +0.0 -0.2
carbon source L-Lysine (C) -0.3 -0.3 -0.3 -0.1 -0.5
carbon source NAG (C) -0.1 -0.2 -0.5 -0.2 -0.4
nitrogen source NAG (N) -0.1 +0.2 -1.2 -0.2 -0.2
carbon source D-Ribose (C) -0.2 -0.1 -0.1 -0.6 -0.5
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) -0.1 +0.1 -0.2 -0.5 -0.5
carbon source D-Mannitol (C) -0.2 -0.3 +0.4 -0.4 -0.7
stress Nickel (II) chloride 1 mM -0.0 -0.1 -0.8 -0.2 +0.1
carbon source D-Ribose (C) -0.2 -0.2 +0.3 -0.5 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +0.2 -0.0 -0.8 -0.4
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.3 -0.1 -0.4 -0.2 -0.6
carbon source D-Mannitol (C) -0.3 -0.1 +0.4 -0.3 -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 +0.2 +0.4 -1.0 -0.1
lb LB +0.1 +0.1 -1.2 +0.1 +0.2
tsb Day4 LB -0.0 -0.0 +0.3 -0.7 -0.3
stress Chloride 200 mM +0.1 -0.0 +0.2 -0.6 -0.5
nitrogen source L-Arginine (N) +0.1 -0.3 -0.8 -0.3 +0.7
nitrogen source L-Leucine (N) -0.2 +0.1 -0.7 +0.2 +0.3
nitrogen source L-Asparagine (N) -0.3 -0.2 -1.0 +0.5 +0.8
stress Paraquat dichloride 0.2 mg/ml +0.0 +0.1 -0.9 +0.1 +0.3
nutrient L-Histidine +0.1 +0.1 -0.8 -0.1 +0.3
pH LB, pH6 +0.4 +0.2 -0.5 -0.2 -0.1
nitrogen source L-Serine (N) -0.1 +0.1 -0.8 +0.4 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.2 +0.0 +0.9 +0.0 -0.3
r2a control R2A control for volatile experiments -0.2 +0.1 +1.0 +0.2 -0.2
stress Chlorite 0.1 mM +0.5 +0.1 +0.4 +0.2 -0.1
stress perchlorate 10 mM +0.6 +0.2 +0.4 -0.1 +0.1
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