Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc01576 and SMc01579 are separated by 27 nucleotidesSMc01579 and SMc01582 are separated by 208 nucleotidesSMc01582 and SMc01588 overlap by 4 nucleotidesSMc01588 and SMc01594 are separated by 197 nucleotides SMc01576: SMc01576 - oxidoreductase, at 2,384,057 to 2,385,346 SMc01576 SMc01579: SMc01579 - hypothetical protein, at 2,385,374 to 2,386,090 SMc01579 SMc01582: SMc01582 - alcohol dehydrogenase, at 2,386,299 to 2,387,444 SMc01582 SMc01588: SMc01588 - aldehyde dehydrogenase, at 2,387,441 to 2,388,826 SMc01588 SMc01594: SMc01594 - hypothetical protein, at 2,389,024 to 2,390,388 SMc01594
Group Condition SMc01576 SMc01579 SMc01582 SMc01588 SMc01594
carbon source pipercolic (C) -6.5 -0.9 -0.0 +0.1 -0.1
carbon source pipercolic (C) -5.2 -1.5 -0.0 -0.0 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -4.4 -0.3 -0.0 +0.1
stress Aluminum chloride +0.1 -1.9 -0.5 -0.1 -0.6
nitrogen source L-Arginine (N) -0.1 -2.1 -0.1 -0.2 -0.2
nitrogen source Uridine (N) +0.0 -2.7 -0.2 +0.1 -0.0
stress Thallium(I) acetate 0.001 mg/ml +0.2 -2.5 -0.1 +0.2 +0.2
lb LB +0.2 -2.1 -0.0 -0.0 -0.0
carbon source 5-Aminovaleric (C) -0.0 -1.8 -0.0 +0.1 -0.1
carbon source L-Alanine (C) +0.0 -1.6 -0.1 -0.2 -0.0
carbon source L-Alanine (C) +0.2 -1.8 -0.1 -0.0 -0.1
nitrogen source L-Histidine (N) -0.1 -1.2 -0.5 -0.1 +0.1
lb LB +0.1 -1.9 -0.0 +0.1 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 -2.0 -0.1 +0.0 +0.1
r2a-hepes control R2A-HEPES control for volatile experiments -0.2 -1.4 +0.0 -0.1 -0.1
carbon source L-Lactate (C) +0.1 -1.5 -0.0 -0.0 -0.1
carbon source D-Xylose (C) +0.0 -1.7 +0.0 +0.0 +0.0
nutrient L-Lysine +0.3 -1.6 -0.0 -0.0 -0.1
carbon source Protocatechuic Acid (C) +0.0 -1.4 +0.0 -0.1 +0.0
carbon source D-Glucose (C) +0.0 -1.3 -0.1 -0.0 +0.1
stress nitrate 40 mM +0.2 -1.8 +0.1 +0.0 +0.0
lb LB +0.1 -1.0 -0.1 -0.1 -0.2
carbon source methyl-beta-D-xylopyranoside (C) -0.1 -1.3 +0.1 +0.2 +0.1
nitrogen source D-Glucosamine Hydrochloride (N) +0.3 -1.3 -0.1 -0.1 +0.2
nitrogen source L-Leucine (N) +0.5 -1.3 +0.2 +0.1 +0.1
r2a control R2A control for volatile experiments -0.5 -0.6 +0.2 +0.3 +0.2
carbon source D-Glucose (C) +0.2 -0.9 +0.2 +0.2 -0.0
stress copper (II) chloride 1 mM +0.4 -0.8 -0.1 +0.1 +0.4
nitrogen source L-Asparagine (N) -0.1 +1.3 -0.3 +0.1 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +1.6 +0.2 -0.1 -0.0
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