Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc01562 and SMc01563 are separated by 221 nucleotidesSMc01563 and SMc01564 are separated by 432 nucleotidesSMc01564 and SMc01565 are separated by 23 nucleotidesSMc01565 and SMc01566 are separated by 259 nucleotides SMc01562: SMc01562 - hypothetical protein, at 2,501,357 to 2,501,647 SMc01562 SMc01563: SMc01563 - RNA polymerase sigma factor RpoD, at 2,501,869 to 2,503,923 SMc01563 SMc01564: SMc01564 - L-threonine 3-dehydrogenase, at 2,504,356 to 2,505,390 SMc01564 SMc01565: SMc01565 - 2-amino-3-ketobutyrate CoA ligase, at 2,505,414 to 2,506,601 SMc01565 SMc01566: SMc01566 - ATP-dependent DNA helicase, at 2,506,861 to 2,508,771 SMc01566
Group Condition SMc01562 SMc01563 SMc01564 SMc01565 SMc01566
nitrogen source L-Histidine (N) -1.1 N.D. -0.2 -0.2 +0.1
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.1 N.D. -0.3 -0.6 +0.1
stress Cisplatin 0.0005 mg/ml -0.1 N.D. -0.7 +0.3 -0.3
carbon source D-Cellobiose (C) -0.5 N.D. -0.0 -0.3 +0.1
carbon source D-Maltose (C) -0.4 N.D. +0.1 -0.3 +0.0
stress Chlorite 0.1 mM +0.1 N.D. -0.6 +0.0 -0.2
stress Sisomicin 0.004 mg/ml -0.5 N.D. +0.3 -0.1 -0.3
stress copper (II) chloride 1 mM -0.8 N.D. +0.3 +0.0 -0.2
r2a control R2A control for volatile experiments -0.3 N.D. +0.2 -0.4 +0.0
stress Paraquat dichloride 0.2 mg/ml -0.4 N.D. -0.1 +0.3 -0.1
r2a-hepes control R2A-HEPES control for volatile experiments -0.4 N.D. +0.1 -0.2 +0.2
stress Nickel (II) chloride 0.5 mM -0.5 N.D. -0.1 +0.3 +0.1
lb no stress control LB no stress control +0.2 N.D. -0.1 -0.4 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 N.D. -0.6 +0.2 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 N.D. -0.5 +0.2 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 N.D. +0.5 -0.1 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 N.D. -0.1 +0.5 -0.3
nutrient L-Lysine +0.2 N.D. +0.3 -0.2 -0.3
stress D-Cycloserine 0.05 mg/ml +0.1 N.D. -0.5 +0.5 -0.2
pH LB, pH6 +0.2 N.D. -0.3 -0.2 +0.3
nitrogen source L-Arginine (N) +0.4 N.D. +0.2 -0.6 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 N.D. -0.0 -0.3 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 N.D. +0.3 +0.4 +0.2
lb LB -0.4 N.D. +0.1 +0.6 +0.1
pH LB, pH8 +0.2 N.D. -0.2 +0.4 +0.2
lb LB -0.2 N.D. +0.0 +0.6 +0.1
carbon source Lactitol (C) +0.5 N.D. +0.3 +0.1 -0.3
lb LB +0.1 N.D. -0.1 +0.8 +0.1
nitrogen source Cytosine (N) +0.4 N.D. -0.0 +0.6 +0.1
stress perchlorate 10 mM +0.2 N.D. -0.0 +0.8 +0.3
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