Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc01561 and SMc01562 are separated by 368 nucleotidesSMc01562 and SMc01563 are separated by 221 nucleotidesSMc01563 and SMc01564 are separated by 432 nucleotidesSMc01564 and SMc01565 are separated by 23 nucleotides SMc01561: SMc01561 - transmembrane protein, at 2,500,419 to 2,500,988 SMc01561 SMc01562: SMc01562 - hypothetical protein, at 2,501,357 to 2,501,647 SMc01562 SMc01563: SMc01563 - RNA polymerase sigma factor RpoD, at 2,501,869 to 2,503,923 SMc01563 SMc01564: SMc01564 - L-threonine 3-dehydrogenase, at 2,504,356 to 2,505,390 SMc01564 SMc01565: SMc01565 - 2-amino-3-ketobutyrate CoA ligase, at 2,505,414 to 2,506,601 SMc01565
Group Condition SMc01561 SMc01562 SMc01563 SMc01564 SMc01565
nitrogen source L-Histidine (N) +0.2 -1.1 N.D. -0.2 -0.2
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.1 -0.1 N.D. -0.3 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -0.4 N.D. -0.2 +0.1
stress Chlorite 0.1 mM -0.5 +0.1 N.D. -0.6 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -0.2 N.D. +0.1 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -0.3 N.D. -0.0 +0.3
carbon source D-Maltose (C) +0.1 -0.4 N.D. +0.1 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.1 N.D. -0.6 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -0.1 N.D. +0.0 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.6 N.D. +0.5 -0.1
stress Cisplatin 0.0005 mg/ml +0.1 -0.1 N.D. -0.7 +0.3
stress Nickel (II) chloride 0.5 mM +0.0 -0.5 N.D. -0.1 +0.3
nitrogen source L-Arginine (N) -0.1 +0.4 N.D. +0.2 -0.6
stress copper (II) chloride 1 mM +0.3 -0.8 N.D. +0.3 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.6 N.D. +0.3 +0.4
stress Paraquat dichloride 0.2 mg/ml +0.2 -0.4 N.D. -0.1 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.2 N.D. -0.1 +0.5
carbon source L-Alanine (C) +0.3 -0.4 N.D. +0.2 +0.1
pH LB, pH6 +0.5 +0.2 N.D. -0.3 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.0 +0.9 N.D. -0.0 -0.3
nutrient L-Lysine +0.3 +0.2 N.D. +0.3 -0.2
lb LB +0.3 -0.4 N.D. +0.1 +0.6
stress D-Cycloserine 0.05 mg/ml +0.5 +0.1 N.D. -0.5 +0.5
carbon source Fumarate (C) +0.3 +0.4 N.D. +0.2 -0.1
nitrogen source Cytosine (N) -0.2 +0.4 N.D. -0.0 +0.6
lb LB +0.4 -0.2 N.D. +0.0 +0.6
carbon source Lactitol (C) +0.2 +0.5 N.D. +0.3 +0.1
lb LB +0.3 +0.1 N.D. -0.1 +0.8
stress Polymyxin B sulfate 0.00005 mg/ml +0.6 +0.1 N.D. -0.0 +0.5
stress perchlorate 10 mM +0.4 +0.2 N.D. -0.0 +0.8
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