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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc01745 and SMc04442 are separated by 102 nucleotides
SMc04442 and SMc01548 are separated by 142 nucleotides
SMc01548 and SMc01744 are separated by 138 nucleotides
SMc01744 and SMc01549 are separated by 209 nucleotides
SMc01745: SMc01745 - hypothetical protein, at 2,485,838 to 2,486,473
SMc01745
SMc04442: SMc04442 - acetyltransferase, at 2,486,576 to 2,487,100
SMc04442
SMc01548: SMc01548 - hypothetical protein, at 2,487,243 to 2,487,554
SMc01548
SMc01744: SMc01744 - hypothetical protein, at 2,487,693 to 2,488,334
SMc01744
SMc01549: SMc01549 - hypothetical protein, at 2,488,544 to 2,489,170
SMc01549
Group
Condition
SMc01745
SMc04442
SMc01548
SMc01744
SMc01549
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.0
+0.2
-0.8
-0.1
-0.7
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.4
-0.3
-0.2
-0.3
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.5
-0.3
-0.6
+0.1
+0.0
r2a control
R2A control for volatile experiments
-0.1
-0.0
-0.3
-0.3
-0.4
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.3
-0.2
-0.4
+0.2
-0.2
lb no stress control
LB no stress control
-0.4
-0.3
-0.2
+0.0
-0.1
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.1
-0.3
-0.4
-0.1
+0.1
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.2
-0.2
-0.4
+0.1
-0.1
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.0
-0.3
-0.4
-0.1
+0.1
nitrogen source
nitrate (N)
+0.1
-0.2
-0.3
-0.3
+0.1
carbon source
L-Alanine (C)
-0.2
+0.1
-0.3
-0.1
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
+0.2
-0.3
+0.3
-0.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
-0.0
+0.2
-0.3
-0.5
nitrogen source
L-Leucine (N)
-0.1
-0.3
+0.3
-0.3
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.0
+0.3
-0.2
-0.1
-0.4
stress
nitrate 40 mM
+0.1
+0.0
-0.3
-0.3
+0.2
lb
LB
-0.3
-0.1
+0.4
-0.2
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.3
+0.5
+0.1
-0.1
-0.2
stress
Cisplatin 0.001 mg/ml
+0.4
+0.3
-0.4
-0.1
-0.1
stress
Chlorite 0.1 mM
-0.4
+0.1
-0.3
+0.2
+0.3
nutrient
Min media with glucose
+0.6
-0.1
-0.2
-0.1
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.1
+0.7
+0.2
-0.4
pH
LB, pH6
+0.4
-0.1
+0.2
-0.1
+0.2
stress
Aluminum chloride
+0.2
-0.1
+0.7
-0.0
-0.2
nitrogen source
Uridine (N)
-0.3
+0.1
+0.7
-0.1
+0.0
nitrogen source
L-Arginine (N)
+0.7
-0.3
+0.3
-0.2
+0.1
stress
Paraquat dichloride 0.2 mg/ml
+0.5
-0.1
+0.2
-0.1
-0.0
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.4
+0.4
-0.1
+0.4
+0.3
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.6
+0.5
+0.5
+0.2
-0.2
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.3
+0.1
+0.5
+0.4
+0.6
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