Fitness for 5 genes in Sinorhizobium meliloti 1021

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 243 experiments or choose conditions or try the comparative fitness browser

500 ntSMc01505 and SMc01504 are separated by 160 nucleotidesSMc01504 and SMc01503 are separated by 382 nucleotidesSMc01503 and SMc01502 are separated by 83 nucleotidesSMc01502 and SMc01501 overlap by 4 nucleotides SMc01505: SMc01505 - hypothetical protein, at 2,624,022 to 2,624,189 SMc01505 SMc01504: SMc01504 - two-component response regulator, at 2,624,350 to 2,625,144 SMc01504 SMc01503: SMc01503 - sugar kinase, at 2,625,527 to 2,627,110 SMc01503 SMc01502: SMc01502 - hydrolase phosphatase, at 2,627,194 to 2,627,868 SMc01502 SMc01501: SMc01501 - mannitol 2-dehydrogenase, at 2,627,865 to 2,629,349 SMc01501
Group Condition SMc01505 SMc01504 SMc01503 SMc01502 SMc01501
carbon source D-Mannitol (C) +0.1 +0.4 -1.3 -0.3 -4.6
carbon source D-Mannitol (C) +0.3 +0.5 -1.8 +0.1 -4.8
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.0 -0.0 -0.0 -1.9 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.0 +0.1 +0.1 -1.0 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.0 -0.2 -0.0 -0.4 -0.4
carbon source L-Lysine (C) -1.8 +0.4 +0.1 -0.7 -1.9
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 -0.2 -0.2 -0.6 -2.6
lb LB -1.4 +0.2 -0.1 -0.8 -1.2
carbon source D-Arabinose (C) -0.1 +0.1 +0.4 +0.8 -4.3
nitrogen source D-Glucosamine Hydrochloride (N) -2.5 +0.7 +0.0 -0.4 -0.9
carbon source L-Proline (C) -1.9 +0.5 -0.0 -0.4 -1.2
carbon source L-Histidine (C) -1.5 +1.0 -0.0 -0.7 -1.6
carbon source L-Leucine (C) -1.0 +0.5 +0.1 -0.6 -1.6
carbon source L-Lysine (C) -1.9 +1.2 +0.0 -0.7 -0.7
carbon source L-Glutamine (C) -1.5 +0.7 +0.1 -0.6 -0.5
carbon source L-Lysine (C) -0.9 +1.3 +0.0 -0.6 -1.5
carbon source pipercolic (C) -2.3 +2.3 +0.0 -0.3 -1.3
nitrogen source L-Arginine (N) +2.3 +0.3 -0.3 -2.2 -1.7
carbon source D-Glucosamine Hydrochloride (C) -0.1 +0.8 +0.0 -0.2 -2.0
carbon source Xylobiose (C) +0.4 +0.5 +0.1 -0.8 -1.7
carbon source D-Ribose (C) -1.6 +1.3 +0.2 -0.2 -0.2
carbon source pipercolic (C) -2.0 +2.2 -0.0 -0.2 -0.5
carbon source 5-Aminovaleric (C) -1.5 +1.1 +0.2 -0.3 -0.0
carbon source L-Alanine (C) -1.1 +2.4 -0.0 -0.3 -1.3
carbon source acetate (C) +0.6 +0.8 +0.3 -1.2 -0.7
stress Polymyxin B sulfate 0.00005 mg/ml -1.3 +0.6 +0.1 +0.1 +1.2
carbon source L-Alanine (C) -0.3 +2.4 +0.1 -0.0 +0.4
nitrogen source nitrate (N) +0.7 +1.1 -0.2 +0.1 +1.2
carbon source Myristic (C) +0.8 +2.4 +0.1 +0.1 +0.1
carbon source Myristic (C) +0.6 +2.4 +0.1 +0.2 +0.3
remove
SMc01505
plot		 remove
SMc01504
plot		 remove
SMc01503		 remove
SMc01502
plot		 remove
SMc01501
plot