Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc01502 and SMc01501 overlap by 4 nucleotidesSMc01501 and SMc01500 are separated by 26 nucleotidesSMc01500 and SMc01499 overlap by 4 nucleotidesSMc01499 and SMc01498 are separated by 30 nucleotides SMc01502: SMc01502 - hydrolase phosphatase, at 2,627,194 to 2,627,868 SMc01502 SMc01501: SMc01501 - mannitol 2-dehydrogenase, at 2,627,865 to 2,629,349 SMc01501 SMc01500: SMc01500 - sorbitol dehydrogenase, at 2,629,376 to 2,630,149 SMc01500 SMc01499: SMc01499 - ATP-binding transport ABC transporter protein, at 2,630,146 to 2,631,147 SMc01499 SMc01498: SMc01498 - sorbitol/mannitol transport inner membrane protein, at 2,631,178 to 2,632,008 SMc01498
Group Condition SMc01502 SMc01501 SMc01500 SMc01499 SMc01498
carbon source D-Mannitol (C) -0.3 -4.6 -2.9 -3.1 -3.9
carbon source D-Mannitol (C) +0.1 -4.8 -2.6 -3.1 -3.4
carbon source D-Sorbitol (C) -0.2 +0.5 -3.1 -2.1 -1.9
carbon source Maltitol (C) -0.2 +0.5 -2.6 -1.7 -1.5
carbon source D-Arabinose (C) +0.8 -4.3 -2.7 +0.4 +0.4
carbon source Maltitol (C) -0.1 +0.7 -2.4 -1.7 -1.6
nitrogen source L-Arginine (N) -2.2 -1.7 -1.0 -0.1 +0.0
carbon source Lactitol (C) +0.0 -0.2 -1.3 -1.2 -0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.6 -0.3 +0.2 -0.1
carbon source Lactitol (C) +0.2 +0.0 -1.6 -1.1 -0.8
carbon source L-Lysine (C) -0.7 -1.9 -0.4 +0.1 +0.1
carbon source Xylobiose (C) -0.6 -1.5 -0.6 -0.2 +0.1
carbon source acetate (C) -0.2 -1.4 -0.5 -0.3 -0.3
carbon source Xylobiose (C) -0.8 -1.7 -0.3 +0.0 +0.2
carbon source L-Lysine (C) -0.6 -1.5 -0.2 -0.0 +0.0
carbon source Lactulose (C) -0.3 -1.3 -0.3 -0.3 -0.1
carbon source D-Glucosamine Hydrochloride (C) -0.2 -2.0 -0.5 +0.2 +0.1
carbon source D-Maltose (C) -0.7 -1.3 -0.6 +0.2 +0.1
stress Cisplatin 0.001 mg/ml +0.0 -1.7 -0.5 -0.1 +0.1
carbon source L-Leucine (C) -0.6 -1.6 -0.1 +0.0 +0.1
carbon source acetate (C) -1.2 -0.7 -0.2 +0.1 -0.0
carbon source D-Cellobiose (C) -0.4 -1.5 -0.2 +0.2 +0.0
carbon source L-Histidine (C) -0.7 -1.6 +0.0 +0.2 +0.1
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.8 +0.3 -1.0 -0.1 +0.0
lb LB -0.8 -1.2 -0.0 +0.2 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.9 +0.1 +0.0 +0.4 +0.2
stress Aluminum chloride +0.4 -1.7 +0.4 +0.1 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 -1.1 -0.3 +0.1 +0.4
tsb Day4 LB +0.7 +1.0 +0.4 -0.1 -0.1
r2a control R2A control for volatile experiments +0.2 +1.4 +0.3 +0.2 +0.4
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