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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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500 nt
SMc01451 and SMc01452 are separated by 82 nucleotides
SMc01452 and SMc01453 are separated by 476 nucleotides
SMc01453 and SMc01454 are separated by 314 nucleotides
SMc01454 and SMc01455 are separated by 100 nucleotides
SMc01451: SMc01451 - hypothetical protein, at 2,292,203 to 2,292,418
SMc01451
SMc01452: SMc01452 - hypothetical protein, at 2,292,501 to 2,292,743
SMc01452
SMc01453: SMc01453 - transposase, at 2,293,220 to 2,294,383
SMc01453
SMc01454: SMc01454 - hypothetical protein, at 2,294,698 to 2,298,402
SMc01454
SMc01455: SMc01455 - D-lactate dehydrogenase (cytochrome) protein, at 2,298,503 to 2,299,909
SMc01455
Group
Condition
SMc01451
SMc01452
SMc01453
SMc01454
SMc01455
carbon source
acetate (C)
N.D.
+0.1
N.D.
-2.7
-0.2
stress
A22 0.02 mg/ml
N.D.
-0.1
N.D.
-1.9
-0.4
carbon source
acetate (C)
N.D.
+0.2
N.D.
-2.6
+0.1
carbon source
Lactitol (C)
N.D.
-0.3
N.D.
-1.6
-0.2
nitrogen source
nitrate (N)
N.D.
-0.6
N.D.
-1.0
-0.5
nitrogen source
Cytosine (N)
N.D.
-0.4
N.D.
-0.8
-0.8
carbon source
Lactitol (C)
N.D.
-0.1
N.D.
-1.6
-0.0
carbon source
Lactulose (C)
N.D.
-0.3
N.D.
-1.0
-0.3
carbon source
D-Trehalose (C)
N.D.
-0.4
N.D.
-0.9
-0.3
nitrogen source
NAG (N)
N.D.
-0.4
N.D.
-0.3
-0.8
carbon source
D-Glucose (C)
N.D.
-0.5
N.D.
-0.9
-0.1
carbon source
D-Glucose (C)
N.D.
-0.2
N.D.
-1.0
-0.3
carbon source
D-Glucose (C)
N.D.
+0.1
N.D.
-1.2
-0.3
nitrogen source
Uridine (N)
N.D.
+0.2
N.D.
-0.8
-0.7
carbon source
L-Lysine (C)
N.D.
-0.3
N.D.
-0.9
+0.3
carbon source
pipercolic (C)
N.D.
-0.1
N.D.
-1.2
+0.3
stress
copper (II) chloride 1 mM
N.D.
+0.5
N.D.
+0.8
-0.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.4
N.D.
+0.8
+0.8
stress
Chloride 200 mM
N.D.
-0.3
N.D.
+1.0
+0.5
stress
Paraquat dichloride 0.2 mg/ml
N.D.
-0.4
N.D.
+1.0
+0.8
stress
Paraquat dichloride 0.3 mg/ml
N.D.
+0.2
N.D.
+1.1
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.6
N.D.
+0.4
+0.7
stress
Nickel (II) chloride 1 mM
N.D.
-0.2
N.D.
+1.4
+0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
+0.4
N.D.
+0.9
+0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
+0.2
N.D.
+0.8
+0.9
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.2
N.D.
+0.8
+0.8
stress
nitrate 40 mM
N.D.
+0.2
N.D.
+1.6
+0.2
stress
perchlorate 10 mM
N.D.
+0.1
N.D.
+2.2
+0.9
pH
LB, pH6
N.D.
-0.3
N.D.
+3.9
+0.7
pH
LB, pH6
N.D.
+0.0
N.D.
+4.1
+0.2
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